RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 GNB3P16520 340 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 TNFAIP3P21580 790 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 DRG2P55039 364 aaKnown RBP3.4□□□□□ -1.87
CD46-217ENST00000493796 PPP2R2BQ00005 443 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 FAM180BQ6P0A1 224 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 SCYL3Q8IZE3 742 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 L3MBTL4Q8NA19 623 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 ADAD2Q8NCV1 583 aaKnown RBP3.4□□□□□ -1.87
CD46-217ENST00000493796 OR2T12Q8NG77 320 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 WBP1Q96G27 269 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 LRR1Q96L50 414 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 MOV10L1Q9BXT6 1211 aaKnown RBP3.4□□□□□ -1.87
CD46-217ENST00000493796 SEPT11Q9NVA2 429 aaKnown RBP3.4□□□□□ -1.87
CD46-217ENST00000493796 C2orf42Q9NWW7 574 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 MIOSQ9NXC5 875 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 DNAJB4Q9UDY4 337 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 PA2G4Q9UQ80 394 aaKnown RBP3.4□□□□□ -1.87
CD46-217ENST00000493796 KCNK7Q9Y2U2 307 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 MYH13Q9UKX3 1938 aa3.4□□□□□ -1.87
CD46-217ENST00000493796 CDK5RAP2Q96SN8 1893 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 CENPFP49454 3210 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 DICER1Q9UPY3 1922 aaKnown RBP3.39□□□□□ -1.87
CD46-217ENST00000493796 C10orf71Q711Q0 1435 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 A0A1W2PR77 199 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 CDRT15L2A8MXV6 281 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 CLIC2O15247 247 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 NDUFS4O43181 175 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 RB1P06400 928 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 CLTBP09497 229 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 ZNF883P0CG24 379 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 LIFP15018 202 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 DPEP1P16444 411 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 CKMT2P17540 419 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 CBLP22681 906 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 THOP1P52888 689 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 GCKRQ14397 625 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 KIAA1644Q3SXP7 199 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 SLC10A5Q5PT55 438 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 CCDC30Q5VVM6 783 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 MFSD6Q6ZSS7 791 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 DENND5BQ6ZUT9 1274 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 RSRC2Q7L4I2 434 aaKnown RBP3.39□□□□□ -1.87
CD46-217ENST00000493796 FASTKD5Q7L8L6 764 aaKnown RBP3.39□□□□□ -1.87
CD46-217ENST00000493796 MAATS1Q7Z4T9 603 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 CERS3Q8IU89 383 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 KRTAP7-1Q8IUC3 87 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 PLD3Q8IV08 490 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 MCEMP1Q8IX19 187 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 GPALPP1Q8IXQ4 340 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 ADGRF2Q8IZF7 708 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 ZNF248Q8NDW4 579 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 FRAT1Q92837 279 aaPredicted RBP3.39□□□□□ -1.87
CD46-217ENST00000493796 SLC47A1Q96FL8 570 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 SRSF8Q9BRL6 282 aaKnown RBP3.39□□□□□ -1.87
CD46-217ENST00000493796 SLA2Q9H6Q3 261 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 DNAJC18Q9H819 358 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 PELI2Q9HAT8 420 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 EIF2B3Q9NR50 452 aaKnown RBP3.39□□□□□ -1.87
CD46-217ENST00000493796 DBF4Q9UBU7 674 aaPredicted RBP3.39□□□□□ -1.87
CD46-217ENST00000493796 PNMA2Q9UL42 364 aa3.39□□□□□ -1.87
CD46-217ENST00000493796 EXO1Q9UQ84 846 aaKnown RBP3.39□□□□□ -1.87
CD46-217ENST00000493796 RIC1Q4ADV7 1423 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 PSME4Q14997 1843 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 A6NL46 340 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 ERVV-1B6SEH8 477 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 PLOD2O00469 737 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 NR5A2O00482 541 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 PTP4A3O75365 173 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 CSPG5O95196 566 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 H1F0P07305 194 aaKnown RBP3.38□□□□□ -1.87
CD46-217ENST00000493796 HOXB7P09629 217 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 NMBRP28336 390 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 EPHA2P29317 976 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 GARSP41250 739 aaKnown RBP3.38□□□□□ -1.87
CD46-217ENST00000493796 PRKAA1Q13131 559 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 ALDH1L2Q3SY69 923 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 KLC3Q6P597 504 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 TBC1D1Q86TI0 1168 aaPredicted RBP3.38□□□□□ -1.87
CD46-217ENST00000493796 TTC5Q8N0Z6 440 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 CRYBG2Q8N1P7 616 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 TTC39CQ8N584 583 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 TEX19Q8NA77 164 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 TBC1D16Q8TBP0 767 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 WDR20Q8TBZ3 569 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 ZNF582Q96NG8 517 aaPredicted RBP3.38□□□□□ -1.87
CD46-217ENST00000493796 NAP1L4Q99733 375 aaKnown RBP3.38□□□□□ -1.87
CD46-217ENST00000493796 ASCL2Q99929 193 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 RHNO1Q9BSD3 238 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 FTOQ9C0B1 505 aaKnown RBP eCLIP3.38□□□□□ -1.87
CD46-217ENST00000493796 SIX2Q9NPC8 291 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 COQ3Q9NZJ6 369 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 AMACRQ9UHK6 382 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 KCNJ14Q9UNX9 436 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 NIP7Q9Y221 180 aaKnown RBP eCLIP3.38□□□□□ -1.87
CD46-217ENST00000493796 PCDHGA5Q9Y5G8 931 aa3.38□□□□□ -1.87
CD46-217ENST00000493796 COL1A1P02452 1464 aaPredicted RBP3.38□□□□□ -1.87
CD46-217ENST00000493796 ARAP2Q8WZ64 1704 aa3.37□□□□□ -1.87
CD46-217ENST00000493796 MAGEB17A8MXT2 336 aa3.37□□□□□ -1.87
CD46-217ENST00000493796 PSMD14O00487 310 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms