RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 SPANXN4Q5MJ08 99 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 SPATA31D4Q6ZUB0 917 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 GPR149Q86SP6 731 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 GPR180Q86V85 440 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 CLEC4FQ8N1N0 589 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 BEND7Q8N7W2 519 aaPredicted RBP9.41□□□□□ -0.9
NPHP3-209ENST00000493732 OR10A6Q8NH74 314 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 FIG4Q92562 907 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 FAM162AQ96A26 154 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 FBXL8Q96CD0 374 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 FAM120BQ96EK7 910 aaKnown RBP9.41□□□□□ -0.9
NPHP3-209ENST00000493732 RBM4BQ9BQ04 359 aaKnown RBP9.41□□□□□ -0.9
NPHP3-209ENST00000493732 HEPHQ9BQS7 1158 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 CORO1BQ9BR76 489 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 RBM4Q9BWF3 364 aaKnown RBP9.41□□□□□ -0.9
NPHP3-209ENST00000493732 TRIM8Q9BZR9 551 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 KAT8Q9H7Z6 458 aaKnown RBP9.41□□□□□ -0.9
NPHP3-209ENST00000493732 PLSCR2Q9NRY7 297 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 USE1Q9NZ43 259 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 B4GALT6Q9UBX8 382 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 LIMD1Q9UGP4 676 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 ATP11BQ9Y2G3 1177 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 PCDHGA11Q9Y5H2 935 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 IRAK3Q9Y616 596 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 AP1M2Q9Y6Q5 423 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 DENND4CQ5VZ89 1909 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 TRBV5-3A0A0A0MS03 114 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 H3BSA7 217 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 GNGT2O14610 69 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 SLC9A3R1O14745 358 aaPredicted RBP9.41□□□□□ -0.9
NPHP3-209ENST00000493732 PER2O15055 1255 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 BNIP3LO60238 219 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 MYO1DO94832 1006 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 TIMP1P01033 207 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 PDYNP01213 254 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 THRBP10828 461 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 JUPP14923 745 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 PTPN2P17706 415 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 POLR2EP19388 210 aaKnown RBP9.41□□□□□ -0.9
NPHP3-209ENST00000493732 CA5AP35218 305 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 CTSOP43234 321 aaPredicted RBP9.41□□□□□ -0.9
NPHP3-209ENST00000493732 PNLIPRP1P54315 467 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 EPHA5P54756 1037 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 DEFB103AP81534 67 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 LRRC74AQ0VAA2 488 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 ZNF284Q2VY69 593 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 LDLRAP1Q5SW96 308 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 C10orf62Q5T681 223 aaPredicted RBP9.41□□□□□ -0.9
NPHP3-209ENST00000493732 FRG2Q64ET8 278 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 ERICH5Q6P6B1 374 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 TRAM1L1Q8N609 369 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 DDHD1Q8NEL9 900 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 ZNF555Q8NEP9 628 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 SLC22A17Q8WUG5 538 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 IRF7Q92985 503 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 CLP1Q92989 425 aaKnown RBP9.41□□□□□ -0.9
NPHP3-209ENST00000493732 TMBIM1Q969X1 311 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 NRBF2Q96F24 287 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 CCDC97Q96F63 343 aaPredicted RBP9.41□□□□□ -0.9
NPHP3-209ENST00000493732 SLC47A1Q96FL8 570 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 REXO5Q96IC2 774 aaKnown RBP9.41□□□□□ -0.9
NPHP3-209ENST00000493732 FRG2BQ96QU4 278 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 FAM83CQ9BQN1 747 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 BBS2Q9BXC9 721 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 ACPTQ9BZG2 426 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 CRISPLD2Q9H0B8 497 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 PIF1Q9H611 641 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 HPS4Q9NQG7 708 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 FARSBQ9NSD9 589 aaKnown RBP9.41□□□□□ -0.9
NPHP3-209ENST00000493732 DCAF13Q9NV06 445 aaKnown RBP9.41□□□□□ -0.9
NPHP3-209ENST00000493732 BLOC1S6Q9UL45 172 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 ORC6Q9Y5N6 252 aa9.41□□□□□ -0.9
NPHP3-209ENST00000493732 ZFC3H1O60293 1989 aaKnown RBP9.4□□□□□ -0.9
NPHP3-209ENST00000493732 ANKRD12Q6UB98 2062 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 KCNE1BA0A087WTH5 132 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 MYOCOSA0A1B0GUC4 107 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 TSPAN11A1L157 253 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 PLOD2O00469 737 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 SLCO2B1O94956 709 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 CST1P01037 141 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 ALPLP05186 524 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 GNAO1P09471 354 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 GSTM1P09488 218 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 XPAP23025 273 aaPredicted RBP9.4□□□□□ -0.9
NPHP3-209ENST00000493732 HNF4AP41235 474 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 HLCSP50747 726 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 GSTM4Q03013 218 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 PCDH1Q08174 1060 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 TOP3AQ13472 1001 aaPredicted RBP9.4□□□□□ -0.9
NPHP3-209ENST00000493732 SELPLGQ14242 412 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 PTCHD3Q3KNS1 767 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 RBM48Q5RL73 367 aaKnown RBP9.4□□□□□ -0.9
NPHP3-209ENST00000493732 SUSD1Q6UWL2 747 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 STK32CQ86UX6 486 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 CALHM3Q86XJ0 350 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 HIPK1Q86Z02 1210 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 KLHDC8AQ8IYD2 350 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 ZCCHC7Q8N3Z6 543 aaKnown RBP9.4□□□□□ -0.9
NPHP3-209ENST00000493732 FAM110BQ8TC76 370 aa9.4□□□□□ -0.9
NPHP3-209ENST00000493732 TBC1D20Q96BZ9 403 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms