RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 NPPAP01160 153 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 PCCBP05166 539 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 GPR89BP0CG08 455 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 G6PDP11413 515 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 JUPP14923 745 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 POU3F3P20264 500 aaPredicted RBP13.66□□□□□ -0.22
PTPN7-216ENST00000492977 ITPKAP23677 461 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 VHLP40337 213 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 CDK3Q00526 305 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 RPA4Q13156 261 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 FLOT2Q14254 428 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 TRIM25Q14258 630 aaKnown RBP13.66□□□□□ -0.22
PTPN7-216ENST00000492977 SPATS1Q496A3 300 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 SGO1Q5FBB7 561 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 LRRC74BQ6ZQY2 392 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 TRMT11Q7Z4G4 463 aaKnown RBP13.66□□□□□ -0.22
PTPN7-216ENST00000492977 C11orf96Q7Z7L8 435 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 THOC6Q86W42 341 aaKnown RBP13.66□□□□□ -0.22
PTPN7-216ENST00000492977 ZFAND4Q86XD8 727 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 RGL4Q8IZJ4 473 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 SELENOMQ8WWX9 145 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 FAM131CQ96AQ9 280 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 ASB9Q96DX5 294 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 PKP4Q99569 1192 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 TEX101Q9BY14 249 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 INTS7Q9NVH2 962 aaKnown RBP13.66□□□□□ -0.22
PTPN7-216ENST00000492977 C1orf109Q9NX04 203 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 SERGEFQ9UGK8 458 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 CD300AQ9UGN4 299 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 PACSIN3Q9UKS6 424 aa13.66□□□□□ -0.22
PTPN7-216ENST00000492977 RANBP2P49792 3224 aaKnown RBP13.65□□□□□ -0.22
PTPN7-216ENST00000492977 KLHL33A6NCF5 533 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 NPIPB8E9PQR5 432 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 ACOT8O14734 319 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 ANKRD28O15084 1053 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 SEC22BO75396 215 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 RSL1D1O76021 490 aaKnown RBP13.65□□□□□ -0.22
PTPN7-216ENST00000492977 SLC16A8O95907 504 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 PDYNP01213 254 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 DNTTP04053 509 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 JAK1P23458 1154 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 PRPH2P23942 346 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 IMPA1P29218 277 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 TRIM23P36406 574 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 HALP42357 657 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 BDKRB1P46663 353 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 SESN3P58005 492 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 RPS21P63220 83 aaKnown RBP13.65□□□□□ -0.22
PTPN7-216ENST00000492977 IRF8Q02556 426 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 TRAP1Q12931 704 aaKnown RBP13.65□□□□□ -0.22
PTPN7-216ENST00000492977 CHIT1Q13231 466 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 NAE1Q13564 534 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 TMEM196Q5HYL7 178 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 SWT1Q5T5J6 900 aaKnown RBP13.65□□□□□ -0.22
PTPN7-216ENST00000492977 CACHD1Q5VU97 1274 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 KIAA1211LQ6NV74 962 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 CRTC3Q6UUV7 619 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 LAYNQ6UX15 382 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 XKR5Q6UX68 686 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 UNC5DQ6UXZ4 953 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 LRRTM4Q86VH4 590 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 IL17RCQ8NAC3 791 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 LRRC58Q96CX6 371 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 C1QTNF2Q9BXJ5 285 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 C8orf33Q9H7E9 229 aaPredicted RBP13.65□□□□□ -0.22
PTPN7-216ENST00000492977 FBXL12Q9NXK8 326 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 GPRC5BQ9NZH0 403 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 ABCD2Q9UBJ2 740 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 CD207Q9UJ71 328 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 SCML1Q9UN30 329 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 TMEM98Q9Y2Y6 226 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 POLR3HQ9Y535 204 aaPredicted RBP13.65□□□□□ -0.22
PTPN7-216ENST00000492977 LRRC42Q9Y546 428 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 CDH23Q9H251 3354 aa13.65□□□□□ -0.22
PTPN7-216ENST00000492977 C9JVG2 144 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 CLGNO14967 610 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 PLRG1O43660 514 aaKnown RBP13.64□□□□□ -0.23
PTPN7-216ENST00000492977 PRAMEF4O60810 478 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 EGFP01133 1207 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 DRD1P21728 446 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 ACADLP28330 430 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 IL12AP29459 219 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 HNF4AP41235 474 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 RPL38P63173 70 aaKnown RBP13.64□□□□□ -0.23
PTPN7-216ENST00000492977 MS4A2Q01362 244 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 HMGCS1Q01581 520 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 TLR1Q15399 786 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 CCSMST1Q4G0I0 132 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 PRAMEF9Q5VWM5 478 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 FRG2Q64ET8 278 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 KIAA1161Q6NSJ0 714 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 ZFP1Q6P2D0 407 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 AMZ2Q86W34 360 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 CACUL1Q86Y37 369 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 FAM9CQ8IZT9 166 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 RNF148Q8N7C7 305 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 GLB1L3Q8NCI6 653 aaPredicted RBP13.64□□□□□ -0.23
PTPN7-216ENST00000492977 PPFIBP2Q8ND30 876 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 HIPK4Q8NE63 616 aa13.64□□□□□ -0.23
PTPN7-216ENST00000492977 OR9A1PQ8NGU1 263 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms