RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 GSPT2Q8IYD1 628 aaKnown RBP13.51□□□□□ -0.25
CCM2-217ENST00000492883 LINC01555Q8NAE3 123 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 KDF1Q8NAX2 398 aaPredicted RBP13.51□□□□□ -0.25
CCM2-217ENST00000492883 FBXO15Q8NCQ5 510 aaPredicted RBP13.51□□□□□ -0.25
CCM2-217ENST00000492883 SLC41A2Q96JW4 573 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 HIST1H2AHQ96KK5 128 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 OR2A14Q96R47 310 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 GPR22Q99680 433 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 HIST1H2AJQ99878 128 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 CTRCQ99895 268 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 H2AFJQ9BTM1 129 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 SLC12A9Q9BXP2 914 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 FUT8Q9BYC5 575 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 TRIM54Q9BYV2 358 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 ASPSCR1Q9BZE9 553 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 KLHL25Q9H0H3 589 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 POPDC3Q9HBV1 291 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 ASCL3Q9NQ33 180 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 FBXO8Q9NRD0 319 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 SOHLH2Q9NX45 425 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 ADAMTS6Q9UKP5 1117 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 PCDHB11Q9Y5F2 797 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 PCDHGA7Q9Y5G6 932 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 IKBKGQ9Y6K9 419 aa13.51□□□□□ -0.25
CCM2-217ENST00000492883 ASXL3Q9C0F0 2248 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 ZNF839A8K0R7 811 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 CDRT15L2A8MXV6 281 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 POC1B-GALNT4F8VUJ3 575 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 NVLO15381 856 aaKnown RBP13.5□□□□□ -0.25
CCM2-217ENST00000492883 PHGDHO43175 533 aaKnown RBP13.5□□□□□ -0.25
CCM2-217ENST00000492883 PRAMEF10O60809 474 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 TSPAN12O95859 305 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 CAPNS1P04632 268 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 INHBAP08476 426 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 PVRP15151 417 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 ACY1Q03154 408 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 SP140Q13342 867 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 KCNAB1Q14722 419 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 ARHGAP19Q14CB8 494 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 CYP2A13Q16696 494 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 RAPH1Q70E73 1250 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 TRIM73Q86UV7 250 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 SYTL1Q8IYJ3 562 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 BMPERQ8N8U9 685 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 HMGCLL1Q8TB92 370 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 DENND1AQ8TEH3 1009 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 PDLIM5Q96HC4 596 aaKnown RBP13.5□□□□□ -0.25
CCM2-217ENST00000492883 CCDC138Q96M89 665 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 TRAPPC9Q96Q05 1148 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 OR6C1Q96RD1 312 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 DDA1Q9BW61 102 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 ANKZF1Q9H8Y5 726 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 PARVBQ9HBI1 364 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 PDE7BQ9NP56 450 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 PDE10AQ9Y233 779 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 B3GALT1Q9Y5Z6 326 aa13.5□□□□□ -0.25
CCM2-217ENST00000492883 BPTFQ12830 3046 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 A0A0J9YY10 115 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 C9orf172C9J069 976 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 RIPK2O43353 540 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 SLC16A8O95907 504 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 EBLN1P0CF75 366 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 MYBL2P10244 700 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 FOLR1P15328 257 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 ST6GAL1P15907 406 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 TNFRSF8P28908 595 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 OAS2P29728 719 aaKnown RBP13.49□□□□□ -0.25
CCM2-217ENST00000492883 PEBP1P30086 187 aaKnown RBP13.49□□□□□ -0.25
CCM2-217ENST00000492883 MSH2P43246 934 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 PNLIPRP1P54315 467 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 RAB10P61026 200 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 FASTKQ14296 549 aaKnown RBP13.49□□□□□ -0.25
CCM2-217ENST00000492883 IL11RAQ14626 422 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 SLC5A12Q1EHB4 618 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 MROH9Q5TGP6 573 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 CYB5D1Q6P9G0 228 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 CEACAM20Q6UY09 585 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 CLEC14AQ86T13 490 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 PROSER1Q86XN7 944 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 RASGRP3Q8IV61 690 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 FAM20CQ8IXL6 584 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 D2HGDHQ8N465 521 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 FLVCR1-AS1Q8TAF5 88 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.49□□□□□ -0.255e-8■■■■■ 65.3
CCM2-217ENST00000492883 SMPDL3AQ92484 453 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 DLG3Q92796 817 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 NAF1Q96HR8 494 aaKnown RBP13.49□□□□□ -0.25
CCM2-217ENST00000492883 TEFMQ96QE5 360 aaKnown RBP13.49□□□□□ -0.25
CCM2-217ENST00000492883 PITPNM3Q9BZ71 974 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 B3GNT4Q9C0J1 378 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 APMAPQ9HDC9 416 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 ABCF3Q9NUQ8 709 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 WDR70Q9NW82 654 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 SIDT1Q9NXL6 827 aaKnown RBP13.49□□□□□ -0.25
CCM2-217ENST00000492883 PCDHGA3Q9Y5H0 932 aa13.49□□□□□ -0.25
CCM2-217ENST00000492883 GOLGA4Q13439 2230 aaKnown RBP13.48□□□□□ -0.25
CCM2-217ENST00000492883 RP1P56715 2156 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 TLX3O43711 291 aaPredicted RBP13.48□□□□□ -0.25
CCM2-217ENST00000492883 ABHD2P08910 425 aa13.48□□□□□ -0.25
CCM2-217ENST00000492883 CCDC166P0CW27 439 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms