RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 MRNIPQ6NTE8 343 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 ZNF534Q76KX8 674 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 OTOAQ7RTW8 1153 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 GAS2L3Q86XJ1 694 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 ZNF655Q8N720 491 aaPredicted RBP12□□□□□ -0.49
COL6A1-205ENST00000492851 FDCSPQ8NFU4 85 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 OR2Y1Q8NGV0 311 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 OR2L8Q8NGY9 312 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 FLVCR1-AS1Q8TAF5 88 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 TM9SF4Q92544 642 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 ZNF778Q96MU6 729 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 GBP5Q96PP8 586 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 TCF12Q99081 682 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 SMAD5Q99717 465 aaKnown RBP12□□□□□ -0.49
COL6A1-205ENST00000492851 SPRTNQ9H040 489 aaPredicted RBP12□□□□□ -0.49
COL6A1-205ENST00000492851 SLAMF7Q9NQ25 335 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 EURLQ9NYK6 297 aa12□□□□□ -0.49
COL6A1-205ENST00000492851 A0A0U1RQJ8 604 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 RASGRF2O14827 1237 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 NRDCO43847 1150 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 SRPX2O60687 465 aaPredicted RBP11.99□□□□□ -0.49
COL6A1-205ENST00000492851 CCDC175P0C221 793 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 CBSLP0DN79 551 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 ETS1P14921 441 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 ALAS2P22557 587 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 RPS3P23396 243 aaKnown RBP eCLIP11.99□□□□□ -0.49
COL6A1-205ENST00000492851 OTX2P32243 289 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 CBSP35520 551 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 CSE1LP55060 971 aaKnown RBP11.99□□□□□ -0.49
COL6A1-205ENST00000492851 SOX8P57073 446 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 SRSF1Q07955 248 aaKnown RBP eCLIP11.99□□□□□ -0.49
COL6A1-205ENST00000492851 CHAF1BQ13112 559 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 GRM7Q14831 915 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 NAA25Q14CX7 972 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 ZIC1Q15915 447 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 NKAIN1Q4KMZ8 207 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 VWA5B1Q5TIE3 1220 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 JMJD6Q6NYC1 403 aaPredicted RBP11.99□□□□□ -0.49
COL6A1-205ENST00000492851 NAPRTQ6XQN6 538 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 TRIM73Q86UV7 250 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 MCATQ8IVS2 390 aaKnown RBP11.99□□□□□ -0.49
COL6A1-205ENST00000492851 TRIM58Q8NG06 486 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 CFAP61Q8NHU2 1237 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 PNPLA2Q96AD5 504 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 NRTNQ99748 197 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 MRM3Q9HC36 420 aaKnown RBP11.99□□□□□ -0.49
COL6A1-205ENST00000492851 ENAMQ9NRM1 1142 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 CDYLQ9Y232 598 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 VPS9D1Q9Y2B5 631 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 PTRH2Q9Y3E5 179 aaKnown RBP11.99□□□□□ -0.49
COL6A1-205ENST00000492851 MAP4K5Q9Y4K4 846 aa11.99□□□□□ -0.49
COL6A1-205ENST00000492851 MAGEB16A2A368 324 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 A6NL46 340 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 SORBS2O94875 1100 aaKnown RBP11.98□□□□□ -0.49
COL6A1-205ENST00000492851 ONECUT2O95948 504 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 GP1BBP13224 206 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 PAMP19021 973 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 ITGAXP20702 1163 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 MAGP20916 626 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 SESN2P58004 480 aaPredicted RBP11.98□□□□□ -0.49
COL6A1-205ENST00000492851 BASP1P80723 227 aaKnown RBP11.98□□□□□ -0.49
COL6A1-205ENST00000492851 ATP1A4Q13733 1029 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 NADK2Q4G0N4 442 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 FHL5Q5TD97 284 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 C1orf189Q5VU69 101 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 MRPL14Q6P1L8 145 aaKnown RBP11.98□□□□□ -0.49
COL6A1-205ENST00000492851 LRRC8BQ6P9F7 803 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 MRGPREQ86SM8 312 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 HMGCLL1Q8TB92 370 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 SKA2Q8WVK7 121 aaPredicted RBP11.98□□□□□ -0.49
COL6A1-205ENST00000492851 FKBP10Q96AY3 582 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 MENTQ9BUN1 341 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 KIFC1Q9BW19 673 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 NUDT9Q9BW91 350 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 SLC29A3Q9BZD2 475 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 P2RY12Q9H244 342 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 WDR54Q9H977 334 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 ATP13A2Q9NQ11 1180 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 TREX1Q9NSU2 369 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 TTC7AQ9ULT0 858 aaPredicted RBP11.98□□□□□ -0.49
COL6A1-205ENST00000492851 PLAGL1Q9UM63 463 aa11.98□□□□□ -0.49
COL6A1-205ENST00000492851 A0A1B0GX78 115 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 IQCF5A8MTL0 148 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 FGGP02679 453 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 ESR1P03372 595 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 ZSCAN5DPP0CG00 497 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 TPSB2P20231 275 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 ADARP55265 1226 aaKnown RBP11.97□□□□□ -0.49
COL6A1-205ENST00000492851 SEMA3AQ14563 771 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 MYBPC3Q14896 1274 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 TPSAB1Q15661 275 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 CYP2A13Q16696 494 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 DEFB110Q30KQ9 67 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 DCAF10Q5QP82 559 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 FIGLAQ6QHK4 219 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 IGFL3Q6UXB1 125 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 OVCH1Q7RTY7 1134 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 VRK3Q8IV63 474 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 GALNT16Q8N428 558 aa11.97□□□□□ -0.49
COL6A1-205ENST00000492851 LMNTD1Q8N9Z9 388 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms