RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 TWIST2Q8WVJ9 160 aa9.49□□□□□ -0.89
VPS8-225ENST00000492449 CRELD1Q96HD1 420 aa9.49□□□□□ -0.89
VPS8-225ENST00000492449 CAMKK2Q96RR4 588 aa9.49□□□□□ -0.89
VPS8-225ENST00000492449 LGMNQ99538 433 aa9.49□□□□□ -0.89
VPS8-225ENST00000492449 KCNS3Q9BQ31 491 aa9.49□□□□□ -0.89
VPS8-225ENST00000492449 COPS4Q9BT78 406 aa9.49□□□□□ -0.89
VPS8-225ENST00000492449 RANBP3Q9H6Z4 567 aaPredicted RBP9.49□□□□□ -0.89
VPS8-225ENST00000492449 OLA1Q9NTK5 396 aaKnown RBP9.49□□□□□ -0.89
VPS8-225ENST00000492449 LYARQ9NX58 379 aaKnown RBP9.49□□□□□ -0.89
VPS8-225ENST00000492449 POLG2Q9UHN1 485 aa9.49□□□□□ -0.89
VPS8-225ENST00000492449 LIPT1Q9Y234 373 aa9.49□□□□□ -0.89
VPS8-225ENST00000492449 VPS9D1Q9Y2B5 631 aa9.49□□□□□ -0.89
VPS8-225ENST00000492449 ZNF638Q14966 1978 aaKnown RBP9.49□□□□□ -0.89
VPS8-225ENST00000492449 IQCMA0A1B0GVH7 501 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 FAM234BA2RU67 622 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 ARNTLO00327 626 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 PIP5K1BO14986 540 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 MITFO75030 526 aaPredicted RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 TNFRSF21O75509 655 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 SNAPINO95295 136 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 MT-CO1P00395 513 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 CD19P15391 556 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 SAT1P21673 171 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 PRKACGP22612 351 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 MRPL28Q13084 256 aaKnown RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 POU4F3Q15319 338 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 RPS6KA2Q15349 733 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 PLET1Q6UQ28 207 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 ARHGAP36Q6ZRI8 547 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 DET1Q7L5Y6 550 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 ENKURQ8TC29 256 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 ITCHQ96J02 903 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 MSTO1Q9BUK6 570 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 XYLT2Q9H1B5 865 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 PIGUQ9H490 435 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 PRDM12Q9H4Q4 367 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 GBA2Q9HCG7 927 aaPredicted RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 SLC35C2Q9NQQ7 365 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 TMLHEQ9NVH6 421 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 ZIM2Q9NZV7 527 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 SLAMF8Q9P0V8 285 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 UBQLN2Q9UHD9 624 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 KIF25Q9UIL4 384 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 UBIAD1Q9Y5Z9 338 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 KCNMB2Q9Y691 235 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 MGAMO43451 1857 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 TRIP11Q15643 1979 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 F8W810 466 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 PMPCBO75439 489 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 HGFP14210 728 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 NRIP1P48552 1158 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 KCNQ1P51787 676 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 POLR2JP52435 117 aaKnown RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 HOXC5Q00444 222 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 ZNF169Q14929 603 aaPredicted RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 LTB4RQ15722 352 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 MICAQ29983 383 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 UNC50Q53HI1 259 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 SOWAHCQ53LP3 525 aaPredicted RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 LRRC66Q68CR7 880 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 ANKRD54Q6NXT1 300 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 RPS27LQ71UM5 84 aaKnown RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 LRRC8DQ7L1W4 858 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 CDYL2Q8N8U2 506 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 RDM1Q8NG50 284 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 OR5T2Q8NGG2 359 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 ATOH1Q92858 354 aaPredicted RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 ZNF583Q96ND8 569 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 KCTD15Q96SI1 283 aaPredicted RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 C12orf57Q99622 126 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 MARVELD1Q9BSK0 173 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 C11orf84Q9BUA3 381 aaPredicted RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 REG4Q9BYZ8 158 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 PITHD1Q9GZP4 211 aaPredicted RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 MCOLN1Q9GZU1 580 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 TRIM45Q9H8W5 580 aaPredicted RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 CYP4F12Q9HCS2 524 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 AASSQ9UDR5 926 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 MRPL11Q9Y3B7 192 aaKnown RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 NEUROG3Q9Y4Z2 214 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 MYLKQ15746 1914 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 C9JVG2 144 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 DFFAO00273 331 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 BTN3A1O00481 513 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 SLC22A3O75751 556 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 RECQL5O94762 991 aaPredicted RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 SCELO95171 688 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 LTA4HP09960 611 aaKnown RBP9.48□□□□□ -0.89
VPS8-225ENST00000492449 NMBRP28336 390 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 HOXA9P31269 272 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 PTGER2P43116 358 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 MAGEA2P43356 314 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 DAPP51397 102 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 TAS2R39P59534 338 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 RUNX1T1Q06455 604 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.48□□□□□ -0.89
VPS8-225ENST00000492449 TKFCQ3LXA3 575 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 GNASQ5JWF2 1037 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 KIAA1614Q5VZ46 1190 aa9.48□□□□□ -0.89
VPS8-225ENST00000492449 CPZQ66K79 652 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms