RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 LONRF1Q17RB8 773 aa19.05■□□□□ 0.64
SMC4-222ENST00000490207 PAPD7Q5XG87 772 aaKnown RBP19.05■□□□□ 0.64
SMC4-222ENST00000490207 ZNF517Q6ZMY9 492 aaPredicted RBP19.05■□□□□ 0.64
SMC4-222ENST00000490207 DENND6AQ8IWF6 608 aa19.05■□□□□ 0.64
SMC4-222ENST00000490207 GPR135Q8IZ08 494 aa19.05■□□□□ 0.64
SMC4-222ENST00000490207 C2orf73Q8N5S3 287 aaPredicted RBP19.05■□□□□ 0.64
SMC4-222ENST00000490207 LMNTD1Q8N9Z9 388 aa19.05■□□□□ 0.64
SMC4-222ENST00000490207 APOBEC4Q8WW27 367 aaKnown RBP19.05■□□□□ 0.64
SMC4-222ENST00000490207 RAD51AP1Q96B01 352 aa19.05■□□□□ 0.64
SMC4-222ENST00000490207 SLC22A18Q96BI1 424 aa19.05■□□□□ 0.64
SMC4-222ENST00000490207 CHST8Q9H2A9 424 aa19.05■□□□□ 0.64
SMC4-222ENST00000490207 FBXO6Q9NRD1 293 aaPredicted RBP19.05■□□□□ 0.64
SMC4-222ENST00000490207 STARD5Q9NSY2 213 aa19.05■□□□□ 0.64
SMC4-222ENST00000490207 C20orf96Q9NUD7 363 aaPredicted RBP19.05■□□□□ 0.64
SMC4-222ENST00000490207 PCMTD2Q9NV79 361 aa19.05■□□□□ 0.64
SMC4-222ENST00000490207 TUBD1Q9UJT1 453 aa19.05■□□□□ 0.64
SMC4-222ENST00000490207 BOD1L1Q8NFC6 3051 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 MEN1O00255 615 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 ZNF749O43361 778 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 S1PR4O95977 384 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 MAGP20916 626 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 PTPN4P29074 926 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 CCNFP41002 786 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 SLC1A2P43004 574 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 GABRA4P48169 554 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 CTBP1Q13363 440 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 IZUMO3Q5VZ72 239 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 PCGF5Q86SE9 256 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 FAM20CQ8IXL6 584 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 LMNTD2Q8IXW0 634 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 SYTL1Q8IYJ3 562 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 RAB42Q8N4Z0 105 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 CALML6Q8TD86 181 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 SEC14L1Q92503 715 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 FAM117AQ9C073 453 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 SLC25A18Q9H1K4 315 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 CCDC68Q9H2F9 335 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.04■□□□□ 0.64
SMC4-222ENST00000490207 GALPQ9UBC7 116 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 HEMK1Q9Y5R4 338 aaPredicted RBP19.04■□□□□ 0.64
SMC4-222ENST00000490207 FER1L5A0AVI2 2057 aa19.04■□□□□ 0.64
SMC4-222ENST00000490207 KRT87PA6NCN2 255 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 HCRTR1O43613 425 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 OR2B3O76000 313 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 RECKO95980 971 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 HBQ1P09105 142 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 PGAM1P18669 254 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 PTGIRP43119 386 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 CCSMST1Q4G0I0 132 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 SYVN1Q86TM6 617 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.03■□□□□ 0.64
SMC4-222ENST00000490207 MAGEC3Q8TD91 643 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 RUNDC3BQ96NL0 473 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 FAM167BQ9BTA0 163 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 SPATA7Q9P0W8 599 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 FARSAQ9Y285 508 aaKnown RBP19.03■□□□□ 0.64
SMC4-222ENST00000490207 SAR1BQ9Y6B6 198 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 ZNF462Q96JM2 2506 aa19.03■□□□□ 0.64
SMC4-222ENST00000490207 BANF1O75531 89 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 MATN4O95460 622 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 RAB40ALP0C0E4 278 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 DHX9Q08211 1270 aaKnown RBP19.02■□□□□ 0.64
SMC4-222ENST00000490207 CRYMQ14894 314 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 PTCHD3Q3KNS1 767 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 TTLL9Q3SXZ7 439 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 ACSBG2Q5FVE4 666 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 LCN10Q6JVE6 187 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 FAM198BQ6UWH4 519 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 KCNMB4Q86W47 210 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 CREG2Q8IUH2 290 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 KLHL7Q8IXQ5 586 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 DNAJC22Q8N4W6 341 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 ENDOVQ8N8Q3 282 aaKnown RBP19.02■□□□□ 0.64
SMC4-222ENST00000490207 INTS7Q9NVH2 962 aaKnown RBP19.02■□□□□ 0.64
SMC4-222ENST00000490207 IRAK4Q9NWZ3 460 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 PLCL2Q9UPR0 1127 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 MAN2B2Q9Y2E5 1009 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 KLHL20Q9Y2M5 609 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 KCNMB2Q9Y691 235 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 AP1M2Q9Y6Q5 423 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 FAM169AQ9Y6X4 670 aa19.02■□□□□ 0.64
SMC4-222ENST00000490207 GCN1Q92616 2671 aaKnown RBP19.02■□□□□ 0.63
SMC4-222ENST00000490207 H3BMH7 237 aa19.01■□□□□ 0.63
SMC4-222ENST00000490207 ZSCAN9O15535 394 aaPredicted RBP19.01■□□□□ 0.63
SMC4-222ENST00000490207 SLC28A2O43868 658 aa19.01■□□□□ 0.63
SMC4-222ENST00000490207 FKBP9O95302 570 aa19.01■□□□□ 0.63
SMC4-222ENST00000490207 CLCN7P51798 805 aa19.01■□□□□ 0.63
SMC4-222ENST00000490207 MPP1Q00013 466 aa19.01■□□□□ 0.63
SMC4-222ENST00000490207 NFKB2Q00653 900 aa19.01■□□□□ 0.63
SMC4-222ENST00000490207 DR1Q01658 176 aa19.01■□□□□ 0.63
SMC4-222ENST00000490207 IL10RAQ13651 578 aa19.01■□□□□ 0.63
SMC4-222ENST00000490207 SF1Q15637 639 aaKnown RBP19.01■□□□□ 0.63
SMC4-222ENST00000490207 UGT8Q16880 541 aa19.01■□□□□ 0.63
SMC4-222ENST00000490207 KLHL38Q2WGJ6 581 aa19.01■□□□□ 0.63
SMC4-222ENST00000490207 HSP90AA5PQ58FG0 334 aa19.01■□□□□ 0.63
SMC4-222ENST00000490207 SYDE1Q6ZW31 735 aaPredicted RBP19.01■□□□□ 0.63
SMC4-222ENST00000490207 PRICKLE2Q7Z3G6 844 aa19.01■□□□□ 0.63
SMC4-222ENST00000490207 C9orf43Q8TAL5 461 aaPredicted RBP19.01■□□□□ 0.63
SMC4-222ENST00000490207 HMGCLL1Q8TB92 370 aa19.01■□□□□ 0.63
SMC4-222ENST00000490207 DENND1AQ8TEH3 1009 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms