RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PRDM8Q9NQV8 689 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 DNAJC11Q9NVH1 559 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 WDR70Q9NW82 654 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 TBC1D29Q9UFV1 150 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 DCTN4Q9UJW0 460 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 ZNF225Q9UK10 706 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 ANGPTL3Q9Y5C1 460 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 TTC28Q96AY4 2481 aa13.75□□□□□ -0.21
VPS26A-205ENST00000489656 A0A0G2JND7 137 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 KRT87PA6NCN2 255 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 TRPC5OSA6NMA1 111 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 OR5K4A6NMS3 321 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 ZNF839A8K0R7 811 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 PRR5-ARHGAP8B1AHC4 643 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 GIPC1O14908 333 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 WDR47O94967 919 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 ENO1P06733 434 aaKnown RBP13.74□□□□□ -0.21
VPS26A-205ENST00000489656 EBLN1P0CF75 366 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 TSPAN8P19075 237 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 EPORP19235 508 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 CCND1P24385 295 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 CCNG1P51959 295 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 PNLIPRP1P54315 467 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 NAE1Q13564 534 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 CYP2A13Q16696 494 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 UGT3A2Q3SY77 523 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 GGTA1PQ4G0N0 100 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 LYSMD4Q5XG99 296 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 SLC30A9Q6PML9 568 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 EPGNQ6UW88 154 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 RNF165Q6ZSG1 346 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 EFL1Q7Z2Z2 1120 aaKnown RBP13.74□□□□□ -0.21
VPS26A-205ENST00000489656 SYVN1Q86TM6 617 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 THOC6Q86W42 341 aaKnown RBP13.74□□□□□ -0.21
VPS26A-205ENST00000489656 SDR16C5Q8N3Y7 309 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 OR52B6Q8NGF0 335 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 CCL4L1Q8NHW4 92 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 HMGCLL1Q8TB92 370 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 ZC3H10Q96K80 434 aaKnown RBP13.74□□□□□ -0.21
VPS26A-205ENST00000489656 CAMK1GQ96NX5 476 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 FERD3LQ96RJ6 166 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 RAB11FIP5Q9BXF6 653 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 SHCBP1LQ9BZQ2 653 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 ATG10Q9H0Y0 220 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 TCEAL2Q9H3H9 227 aaPredicted RBP13.74□□□□□ -0.21
VPS26A-205ENST00000489656 KIR3DX1Q9H7L2 352 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 GPRC5BQ9NZH0 403 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 APOBEC3BQ9UH17 382 aaKnown RBP13.74□□□□□ -0.21
VPS26A-205ENST00000489656 TRPS1Q9UHF7 1281 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 LNPEPQ9UIQ6 1025 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 APOBEC2Q9Y235 224 aaKnown RBP13.74□□□□□ -0.21
VPS26A-205ENST00000489656 MDC1Q14676 2089 aaKnown RBP13.74□□□□□ -0.21
VPS26A-205ENST00000489656 SDK1Q7Z5N4 2213 aa13.74□□□□□ -0.21
VPS26A-205ENST00000489656 PCDH15Q96QU1 1955 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 A0A1B0GTL3 188 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 A0A1B0GTW7 788 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 TMEM233B4DJY2 109 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 E7ENX8 843 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 SCAMP1O15126 338 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 KDM1AO60341 852 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 UGDHO60701 494 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 UROSP10746 265 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 CTSEP14091 401 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 SLC2A4P14672 509 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 JUNDP17535 347 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 PRDX3P30048 256 aaKnown RBP13.73□□□□□ -0.21
VPS26A-205ENST00000489656 ERVPABLB-1P60509 514 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 TBPL1P62380 186 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 TAP2Q03519 686 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 E2F2Q14209 437 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 TEAD4Q15561 434 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 PLK5Q496M5 336 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 PEAR1Q5VY43 1037 aaPredicted RBP13.73□□□□□ -0.21
VPS26A-205ENST00000489656 CAPN13Q6MZZ7 669 aaPredicted RBP13.73□□□□□ -0.21
VPS26A-205ENST00000489656 LETMD1Q6P1Q0 360 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 DUS1LQ6P1R4 473 aaKnown RBP13.73□□□□□ -0.21
VPS26A-205ENST00000489656 C6orf89Q6UWU4 347 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 RAB42Q8N4Z0 105 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 AGR3Q8TD06 166 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 MAPK15Q8TD08 544 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 SETD7Q8WTS6 366 aaKnown RBP13.73□□□□□ -0.21
VPS26A-205ENST00000489656 ZFPM2Q8WW38 1151 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 MAELQ96JY0 434 aaKnown RBP13.73□□□□□ -0.21
VPS26A-205ENST00000489656 LRRC61Q9BV99 259 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 ERVMER34-1Q9H9K5 563 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 MEAF6Q9HAF1 191 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 IMP3Q9NV31 184 aaKnown RBP13.73□□□□□ -0.21
VPS26A-205ENST00000489656 INTS7Q9NVH2 962 aaKnown RBP13.73□□□□□ -0.21
VPS26A-205ENST00000489656 SCHIP1Q9P0W5 487 aaPredicted RBP13.73□□□□□ -0.21
VPS26A-205ENST00000489656 TAAR2Q9P1P5 351 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 SUSD2Q9UGT4 822 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 SLC22A14Q9Y267 594 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 CFAP20Q9Y6A4 193 aaKnown RBP13.73□□□□□ -0.21
VPS26A-205ENST00000489656 COLEC10Q9Y6Z7 277 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 RALGAPA1Q6GYQ0 2036 aa13.73□□□□□ -0.21
VPS26A-205ENST00000489656 KIR2DS5A0A0G2JLQ3 304 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 A0A0G2JNG1 304 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 OR52A4PA6NMU1 304 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 KIR2DS3K7RE56 304 aa13.72□□□□□ -0.21
VPS26A-205ENST00000489656 DCTN3O75935 186 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms