RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 TEKT2Q9UIF3 430 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 GNPTGQ9UJJ9 305 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 MAN1B1Q9UKM7 699 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 MKL2Q9ULH7 1088 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 ZNF711Q9Y462 761 aa14.33□□□□□ -0.12
UFD1-209ENST00000489406 USP27XA6NNY8 438 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 UGT1A9O60656 530 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 CD46P15529 392 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 ZNF24P17028 368 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 UGT1A6P19224 532 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 UGT1A1P22309 533 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 OCA2Q04671 838 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 TUBA3CQ13748 450 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 FCRLBQ6BAA4 426 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 SPINK14Q6IE38 97 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 ACAD10Q6JQN1 1059 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 TUBA3EQ6PEY2 450 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 LAPTM4BQ86VI4 370 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 TMTC1Q8IUR5 882 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 P3H2Q8IVL5 708 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 BEST3Q8N1M1 668 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 FAM98AQ8NCA5 519 aaKnown RBP14.32□□□□□ -0.12
UFD1-209ENST00000489406 PHC3Q8NDX5 983 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 OR2L2Q8NH16 312 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 SCMH1Q96GD3 660 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 OR2A14Q96R47 310 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 TP63Q9H3D4 680 aaPredicted RBP14.32□□□□□ -0.12
UFD1-209ENST00000489406 ZWILCHQ9H900 591 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 UGT1A7Q9HAW7 530 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 UGT1A10Q9HAW8 530 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 UGT1A8Q9HAW9 530 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 GDPD2Q9HCC8 539 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 RIC8BQ9NVN3 520 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 CBLCQ9ULV8 474 aa14.32□□□□□ -0.12
UFD1-209ENST00000489406 H3BRJ5 948 aa14.31□□□□□ -0.12
UFD1-209ENST00000489406 GPR39O43194 453 aa14.31□□□□□ -0.12
UFD1-209ENST00000489406 FGFR1OPO95684 399 aaKnown RBP14.31□□□□□ -0.12
UFD1-209ENST00000489406 IFNA2P01563 188 aa14.31□□□□□ -0.12
UFD1-209ENST00000489406 CD53P19397 219 aa14.31□□□□□ -0.12
UFD1-209ENST00000489406 MCM3P25205 808 aa14.31□□□□□ -0.12
UFD1-209ENST00000489406 CD86P42081 329 aa14.31□□□□□ -0.12
UFD1-209ENST00000489406 ZNF165P49910 485 aa14.31□□□□□ -0.12
UFD1-209ENST00000489406 FANCCQ00597 558 aa14.31□□□□□ -0.12
UFD1-209ENST00000489406 RUNX1T1Q06455 604 aa14.31□□□□□ -0.12
UFD1-209ENST00000489406 PRKG2Q13237 762 aa14.31□□□□□ -0.12
UFD1-209ENST00000489406 OR1C1Q15619 314 aa14.31□□□□□ -0.12
UFD1-209ENST00000489406 CYP4V2Q6ZWL3 525 aaPredicted RBP14.31□□□□□ -0.12
UFD1-209ENST00000489406 PHF13Q86YI8 300 aaPredicted RBP14.31□□□□□ -0.12
UFD1-209ENST00000489406 CFAP206Q8IYR0 622 aa14.31□□□□□ -0.12
UFD1-209ENST00000489406 TMEM178AQ8NBL3 297 aa14.31□□□□□ -0.12
UFD1-209ENST00000489406 MAGEE1Q9HCI5 957 aa14.31□□□□□ -0.12
UFD1-209ENST00000489406 A0A0J9YY10 115 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 TRIM64A6NGJ6 449 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 TRIM64BA6NI03 449 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 F8VZ95 297 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 AURKAO14965 403 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 GFPT2O94808 682 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 HLA-DQB2P05538 268 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 MMP2P08253 660 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 PSMA2P25787 234 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 CD96P40200 585 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 ZNF135P52742 658 aaPredicted RBP14.3□□□□□ -0.12
UFD1-209ENST00000489406 EMP2P54851 167 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 LDLRAP1Q5SW96 308 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 KLHDC7AQ5VTJ3 777 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 SARM1Q6SZW1 724 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 KDELC1Q6UW63 502 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 ACAD11Q709F0 780 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 DAAM2Q86T65 1068 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 MCATQ8IVS2 390 aaKnown RBP14.3□□□□□ -0.12
UFD1-209ENST00000489406 OR10Q1Q8NGQ4 319 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 MAML1Q92585 1016 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 PLEKHF2Q9H8W4 249 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 SPHK1Q9NYA1 384 aa14.3□□□□□ -0.12
UFD1-209ENST00000489406 A0A1W2PQ72 361 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 MIPP30301 263 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 ARL4AP40617 200 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 FASTKQ14296 549 aaKnown RBP14.29□□□□□ -0.12
UFD1-209ENST00000489406 BECN1Q14457 450 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 LONRF2Q1L5Z9 754 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 FLYWCH1Q4VC44 716 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 ACER2Q5QJU3 275 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 GPRC6AQ5T6X5 926 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 MON1BQ7L1V2 547 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 ULK2Q8IYT8 1036 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 FMR1NBQ8N0W7 255 aaPredicted RBP14.29□□□□□ -0.12
UFD1-209ENST00000489406 UTP23Q9BRU9 249 aaKnown RBP14.29□□□□□ -0.12
UFD1-209ENST00000489406 CCM2Q9BSQ5 444 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 HGH1Q9BTY7 390 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 MENTQ9BUN1 341 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 XPO4Q9C0E2 1151 aaKnown RBP14.29□□□□□ -0.12
UFD1-209ENST00000489406 ZNF304Q9HCX3 659 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 IL1RAPL1Q9NZN1 696 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 ZNF282Q9UDV7 671 aaPredicted RBP14.29□□□□□ -0.12
UFD1-209ENST00000489406 ICKQ9UPZ9 632 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 KLHL20Q9Y2M5 609 aa14.29□□□□□ -0.12
UFD1-209ENST00000489406 RASGRF2O14827 1237 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 MATN3O15232 486 aa14.28□□□□□ -0.12
UFD1-209ENST00000489406 PHF1O43189 567 aaPredicted RBP14.28□□□□□ -0.12
UFD1-209ENST00000489406 CDC40O60508 579 aaKnown RBP eCLIP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms