RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 PBKQ96KB5 322 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 BIRC8Q96P09 236 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 SLC39A10Q9ULF5 831 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 PLCL2Q9UPR0 1127 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 RUVBL2Q9Y230 463 aaKnown RBP22.16■■□□□ 1.14
COL9A3-213ENST00000489045 KLHL20Q9Y2M5 609 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 NFS1Q9Y697 457 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 AP1M2Q9Y6Q5 423 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 FLNCQ14315 2725 aa22.16■■□□□ 1.14
COL9A3-213ENST00000489045 NBASA2RRP1 2371 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 C9J4A7 227 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 RASGRF2O14827 1237 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 KPNA5O15131 536 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 ZSCAN9O15535 394 aaPredicted RBP22.15■■□□□ 1.14
COL9A3-213ENST00000489045 CBSLP0DN79 551 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 FMO4P31512 558 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 CBSP35520 551 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 BDKRB1P46663 353 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 KLRB1Q12918 225 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 RNF187Q5TA31 235 aaPredicted RBP22.15■■□□□ 1.14
COL9A3-213ENST00000489045 C1orf189Q5VU69 101 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 RHBDD2Q6NTF9 364 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 CASC4Q6P4E1 433 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 CAND1Q86VP6 1230 aaKnown RBP22.15■■□□□ 1.14
COL9A3-213ENST00000489045 SLC22A18Q96BI1 424 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 TRIM56Q9BRZ2 755 aaKnown RBP22.15■■□□□ 1.14
COL9A3-213ENST00000489045 ACSS2Q9NR19 701 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 IRAK4Q9NWZ3 460 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 PCSK5Q92824 1860 aa22.15■■□□□ 1.14
COL9A3-213ENST00000489045 NIPSNAP2O75323 286 aa22.14■■□□□ 1.13
COL9A3-213ENST00000489045 C1orf105O95561 183 aa22.14■■□□□ 1.13
COL9A3-213ENST00000489045 S1PR4O95977 384 aa22.14■■□□□ 1.13
COL9A3-213ENST00000489045 PDGFAP04085 211 aa22.14■■□□□ 1.13
COL9A3-213ENST00000489045 TTC23LQ6PF05 361 aa22.14■■□□□ 1.13
COL9A3-213ENST00000489045 CNSTQ6PJW8 725 aa22.14■■□□□ 1.13
COL9A3-213ENST00000489045 ZNF655Q8N720 491 aaPredicted RBP22.14■■□□□ 1.13
COL9A3-213ENST00000489045 GBP5Q96PP8 586 aa22.14■■□□□ 1.13
COL9A3-213ENST00000489045 RAB11FIP5Q9BXF6 653 aa22.14■■□□□ 1.13
COL9A3-213ENST00000489045 ING2Q9H160 280 aa22.14■■□□□ 1.13
COL9A3-213ENST00000489045 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.14■■□□□ 1.13
COL9A3-213ENST00000489045 DHCR7Q9UBM7 475 aaKnown RBP22.14■■□□□ 1.13
COL9A3-213ENST00000489045 TSR3Q9UJK0 312 aaKnown RBP22.14■■□□□ 1.13
COL9A3-213ENST00000489045 KRT87PA6NCN2 255 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 PFDN6O15212 129 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 ATXN8OSP0DMR3 200 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 PAMP19021 973 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 OGNP20774 298 aaKnown RBP22.13■■□□□ 1.13
COL9A3-213ENST00000489045 COILP38432 576 aaPredicted RBP22.13■■□□□ 1.13
COL9A3-213ENST00000489045 CCL11P51671 97 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 CYP1B1Q16678 543 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 CCSMST1Q4G0I0 132 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 ARMC3Q5W041 872 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 TLDC1Q6P9B6 456 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 CCDC137Q6PK04 289 aaKnown RBP22.13■■□□□ 1.13
COL9A3-213ENST00000489045 TEX19Q8NA77 164 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 RAD51AP1Q96B01 352 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 FAM136AQ96C01 138 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 TCF12Q99081 682 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 TXLNGQ9NUQ3 528 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 EURLQ9NYK6 297 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 IL1RAPL1Q9NZN1 696 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 SAMD15Q9P1V8 674 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 SRPK3Q9UPE1 567 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 PADI2Q9Y2J8 665 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 CRYL1Q9Y2S2 319 aa22.13■■□□□ 1.13
COL9A3-213ENST00000489045 H3BMM5 538 aa22.12■■□□□ 1.13
COL9A3-213ENST00000489045 PGRMC1O00264 195 aaKnown RBP22.12■■□□□ 1.13
COL9A3-213ENST00000489045 ESR1P03372 595 aa22.12■■□□□ 1.13
COL9A3-213ENST00000489045 MLIPQ5VWP3 458 aa22.12■■□□□ 1.13
COL9A3-213ENST00000489045 CILP2Q8IUL8 1156 aa22.12■■□□□ 1.13
COL9A3-213ENST00000489045 ZBTB2Q8N680 514 aa22.12■■□□□ 1.13
COL9A3-213ENST00000489045 PROKR1Q8TCW9 393 aa22.12■■□□□ 1.13
COL9A3-213ENST00000489045 ZNF669Q96BR6 464 aaPredicted RBP22.12■■□□□ 1.13
COL9A3-213ENST00000489045 FOPNLQ96NB1 174 aa22.12■■□□□ 1.13
COL9A3-213ENST00000489045 NAP1L3Q99457 506 aaPredicted RBP22.12■■□□□ 1.13
COL9A3-213ENST00000489045 C17orf62Q9BQA9 187 aa22.12■■□□□ 1.13
COL9A3-213ENST00000489045 DHRS4Q9BTZ2 278 aa22.12■■□□□ 1.13
COL9A3-213ENST00000489045 SLC25A23Q9BV35 468 aa22.12■■□□□ 1.13
COL9A3-213ENST00000489045 NEU2Q9Y3R4 380 aa22.12■■□□□ 1.13
COL9A3-213ENST00000489045 MRFAP1Q9Y605 127 aa22.12■■□□□ 1.13
COL9A3-213ENST00000489045 GOLGA8MH3BSY2 632 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 MLNP12872 115 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 CCNFP41002 786 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 ADARP55265 1226 aaKnown RBP22.11■■□□□ 1.13
COL9A3-213ENST00000489045 DCDP81605 110 aaKnown RBP22.11■■□□□ 1.13
COL9A3-213ENST00000489045 DHX34Q14147 1143 aaKnown RBP22.11■■□□□ 1.13
COL9A3-213ENST00000489045 GBX1Q14549 363 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 SF1Q15637 639 aaKnown RBP22.11■■□□□ 1.13
COL9A3-213ENST00000489045 FCRL6Q6DN72 434 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 NEPROQ6NW34 567 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 CENPUQ71F23 418 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 REXO1L1PQ8IX06 675 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 SLC35F6Q8N357 371 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 MCUQ8NE86 351 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 COG1Q8WTW3 980 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 SERPINB12Q96P63 405 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 NDC1Q9BTX1 674 aa22.11■■□□□ 1.13
COL9A3-213ENST00000489045 XAB2Q9HCS7 855 aaKnown RBP22.11■■□□□ 1.13
COL9A3-213ENST00000489045 INTS7Q9NVH2 962 aaKnown RBP22.11■■□□□ 1.13
COL9A3-213ENST00000489045 GPN3Q9UHW5 284 aaPredicted RBP22.11■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms