RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 RAD51CO43502 376 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 FKBP9O95302 570 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 MATN4O95460 622 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 TUBB4AP04350 444 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 NTRK1P04629 796 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 KLK3P07288 261 aaPredicted RBP13.79□□□□□ -0.2
BRCA1-218ENST00000489037 HBQ1P09105 142 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 MSL3P1P0C860 447 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 TPBGLP0DKB5 382 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 MPC1LP0DKB6 136 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 CBSLP0DN79 551 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 CBSP35520 551 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 DLSTP36957 453 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 STAT5AP42229 794 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 RGS4P49798 205 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 ITGA1P56199 1179 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 MRPS25P82663 173 aaKnown RBP13.79□□□□□ -0.2
BRCA1-218ENST00000489037 GBX1Q14549 363 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 SF1Q15637 639 aaKnown RBP13.79□□□□□ -0.2
BRCA1-218ENST00000489037 KIAA1614Q5VZ46 1190 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 LRRC8EQ6NSJ5 796 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 ZNF549Q6P9A3 640 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 TRIM73Q86UV7 250 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 TAX1BP1Q86VP1 789 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 IGDCC3Q8IVU1 814 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 PALM2Q8IXS6 379 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 C2orf73Q8N5S3 287 aaPredicted RBP13.79□□□□□ -0.2
BRCA1-218ENST00000489037 FBXO36Q8NEA4 188 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 ZNF592Q92610 1267 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 CLIP3Q96DZ5 547 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 RNF31Q96EP0 1072 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 SLC45A3Q96JT2 553 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 PWWP2AQ96N64 755 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 IL17FQ96PD4 163 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 GPR21Q99679 349 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 ARHGAP9Q9BRR9 750 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 IRAK4Q9NWZ3 460 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 GALPQ9UBC7 116 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 CIDEBQ9UHD4 219 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 CDC23Q9UJX2 597 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 KCND3Q9UK17 655 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 RUVBL2Q9Y230 463 aaKnown RBP13.79□□□□□ -0.2
BRCA1-218ENST00000489037 PCDHB3Q9Y5E6 796 aa13.79□□□□□ -0.2
BRCA1-218ENST00000489037 E7EQ34 232 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 KIF2AO00139 706 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-218ENST00000489037 EIF3FO00303 357 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-218ENST00000489037 ATXN7O15265 892 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-218ENST00000489037 ZBTB14O43829 449 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 TIAF1O95411 115 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 F7P08709 466 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-218ENST00000489037 TCN2P20062 427 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 OAS2P29728 719 aaKnown RBP13.78□□□□□ -0.2
BRCA1-218ENST00000489037 HSD17B2P37059 387 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 CAV1Q03135 178 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 CUL1Q13616 776 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 GRB7Q14451 532 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 TEDDM1Q5T9Z0 273 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 STEAP4Q687X5 459 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 GALNT7Q86SF2 657 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 CNTN4Q8IWV2 1026 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 ZBED8Q8IZ13 594 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 OR9A1PQ8NGU1 263 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 PYROXD1Q8WU10 500 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 WBP1Q96G27 269 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 CHRNA10Q9GZZ6 450 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 LHX9Q9NQ69 397 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 ZFATQ9P243 1243 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 CROTQ9UKG9 612 aa13.78□□□□□ -0.2
BRCA1-218ENST00000489037 CORO1CQ9ULV4 474 aaPredicted RBP13.78□□□□□ -0.2
BRCA1-218ENST00000489037 PABPN1LA6NDY0 278 aaKnown RBP13.77□□□□□ -0.21
BRCA1-218ENST00000489037 TK2O00142 265 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 EIF3HO15372 352 aaKnown RBP eCLIP13.77□□□□□ -0.21
BRCA1-218ENST00000489037 KATNA1O75449 491 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 PSIP1O75475 530 aaKnown RBP13.77□□□□□ -0.21
BRCA1-218ENST00000489037 SYF2O95926 243 aaKnown RBP13.77□□□□□ -0.21
BRCA1-218ENST00000489037 AHSGP02765 367 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 ITGB2P05107 769 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 RPS15P62841 145 aaKnown RBP13.77□□□□□ -0.21
BRCA1-218ENST00000489037 MGAT5Q09328 741 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 TSTA3Q13630 321 aaPredicted RBP13.77□□□□□ -0.21
BRCA1-218ENST00000489037 FRG1Q14331 258 aaKnown RBP13.77□□□□□ -0.21
BRCA1-218ENST00000489037 ARHGAP19Q14CB8 494 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 NAA25Q14CX7 972 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 WHAMMP3Q1A5X7 153 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 ZC3H12BQ5HYM0 836 aaKnown RBP13.77□□□□□ -0.21
BRCA1-218ENST00000489037 DUPD1Q68J44 220 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 CDHR3Q6ZTQ4 885 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 CPNE9Q8IYJ1 553 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 GPATCH11Q8N954 259 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 LINC01555Q8NAE3 123 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 OR1L3Q8NH93 324 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 CD200R1Q8TD46 325 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 SLC39A7Q92504 469 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 MR1Q95460 341 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 CATSPER2Q96P56 530 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 NDNQ99608 321 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 MENTQ9BUN1 341 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 ACTR5Q9H9F9 607 aaPredicted RBP13.77□□□□□ -0.21
BRCA1-218ENST00000489037 NSMCE4AQ9NXX6 385 aa13.77□□□□□ -0.21
BRCA1-218ENST00000489037 HEATR5BQ9P2D3 2071 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms