RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 SF1Q15637 639 aaKnown RBP11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 CCSMST1Q4G0I0 132 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 CTSL3PQ5NE16 218 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 ANKRD22Q5VYY1 191 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 ZNF385CQ66K41 422 aaPredicted RBP11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 MRNIPQ6NTE8 343 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 CASC4Q6P4E1 433 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 TTC23LQ6PF05 361 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 CAND1Q86VP6 1230 aaKnown RBP11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 LRRC6Q86X45 466 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 MCATQ8IVS2 390 aaKnown RBP11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 ZBTB2Q8N680 514 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 OR2L8Q8NGY9 312 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 MAGOHBQ96A72 148 aaKnown RBP11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 BIRC8Q96P09 236 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 PANX3Q96QZ0 392 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 TRIM56Q9BRZ2 755 aaKnown RBP11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 SLC25A23Q9BV35 468 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 MRM3Q9HC36 420 aaKnown RBP11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 EURLQ9NYK6 297 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 DHCR7Q9UBM7 475 aaKnown RBP11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 SLC39A10Q9ULF5 831 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 SOX13Q9UN79 622 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 PLAAQ9Y263 795 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 CRYL1Q9Y2S2 319 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 NFS1Q9Y697 457 aa11.49□□□□□ -0.57
CCHCR1-215ENST00000488920 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 RASGRF2O14827 1237 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 ZNF185O15231 689 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 NIPSNAP2O75323 286 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 KLF7O75840 302 aaPredicted RBP11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 TMEM63AO94886 807 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 C1orf105O95561 183 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 ALAS2P22557 587 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 OTX2P32243 289 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 BDKRB1P46663 353 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 PGDP52209 483 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 MLLT10P55197 1068 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 FOXL2P58012 376 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 DCDP81605 110 aaKnown RBP11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 SARNPP82979 210 aaKnown RBP11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 SLC9A5Q14940 896 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 RHBDD2Q6NTF9 364 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 NEPROQ6NW34 567 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 TLDC1Q6P9B6 456 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 CNSTQ6PJW8 725 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 FIGLAQ6QHK4 219 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 RASGEF1CQ8N431 466 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 LPGAT1Q92604 370 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 SLC22A18Q96BI1 424 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 PBKQ96KB5 322 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 GBP5Q96PP8 586 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 TCF12Q99081 682 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 NDC1Q9BTX1 674 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 TXLNGQ9NUQ3 528 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 IL1RAPL1Q9NZN1 696 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 IFT80Q9P2H3 777 aaPredicted RBP11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 GALPQ9UBC7 116 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 GPN3Q9UHW5 284 aaPredicted RBP11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 PADI2Q9Y2J8 665 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 JRKLQ9Y4A0 524 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 MYO18BQ8IUG5 2567 aa11.48□□□□□ -0.57
CCHCR1-215ENST00000488920 SDR42E2A6NKP2 422 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 GOLGA8MH3BSY2 632 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 S1PR4O95977 384 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 F7P08709 466 aaPredicted RBP11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 CHRM3P20309 590 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 COILP38432 576 aaPredicted RBP11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 MAGEA6P43360 314 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 ATP1A4Q13733 1029 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 TYSND1Q2T9J0 566 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 NKAIN1Q4KMZ8 207 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 RNF187Q5TA31 235 aaPredicted RBP11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 FCRL6Q6DN72 434 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 CENPUQ71F23 418 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 TMEM151BQ8IW70 566 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 FDCSPQ8NFU4 85 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 PROKR1Q8TCW9 393 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 RAD51AP1Q96B01 352 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 FOPNLQ96NB1 174 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 C17orf62Q9BQA9 187 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 DHRS4Q9BTZ2 278 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 MLXIPLQ9NP71 852 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 INTS7Q9NVH2 962 aaKnown RBP11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 SAMD15Q9P1V8 674 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 NDOR1Q9UHB4 597 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 SRPK3Q9UPE1 567 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 PTRH2Q9Y3E5 179 aaKnown RBP11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 PCDHGA9Q9Y5G4 932 aaKnown RBP11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 SPTBP11277 2137 aa11.47□□□□□ -0.57
CCHCR1-215ENST00000488920 UBR5O95071 2799 aaPredicted RBP11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 H3BMM5 538 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 PFDN6O15212 129 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 PRICKLE3O43900 615 aaPredicted RBP11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 CNOT3O75175 753 aaKnown RBP11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 ESR1P03372 595 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 PAMP19021 973 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 MCM3P25205 808 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 PSMB5P28074 263 aa11.46□□□□□ -0.57
CCHCR1-215ENST00000488920 RAPSNQ13702 412 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms