RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 TMEM45AQ9NWC5 275 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 PAK1IP1Q9NWT1 392 aaPredicted RBP12.37□□□□□ -0.43
CLIC4-202ENST00000488683 DOLKQ9UPQ8 538 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 CORINQ9Y5Q5 1042 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 A0A1W2PRU2 124 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 DYTNA2CJ06 578 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 OR2AG2A6NM03 316 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 IFRD1O00458 451 aaPredicted RBP12.37□□□□□ -0.43
CLIC4-202ENST00000488683 E2F6O75461 281 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 UGT2B4P06133 528 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 ITGALP20701 1170 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 DGKAP23743 735 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 AQP1P29972 269 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 TGFBR1P36897 503 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 GNPDA1P46926 289 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 RGS4P49798 205 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 AP1S1P61966 158 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 SMN1Q16637 294 aaKnown RBP12.37□□□□□ -0.43
CLIC4-202ENST00000488683 CCSMST1Q4G0I0 132 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 CES5AQ6NT32 575 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 FAM180BQ6P0A1 224 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 NEK5Q6P3R8 708 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 GAREM2Q75VX8 874 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 VTCN1Q7Z7D3 282 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 OR7A2PQ8NGA2 310 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 SELENOMQ8WWX9 145 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 ASIC4Q96FT7 647 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 TRMT2BQ96GJ1 504 aaKnown RBP12.37□□□□□ -0.43
CLIC4-202ENST00000488683 CEP295NLQ96MC4 621 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 MTERF1Q99551 399 aaKnown RBP12.37□□□□□ -0.43
CLIC4-202ENST00000488683 PKD2L2Q9NZM6 624 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 TMPRSS11EQ9UL52 423 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 ABCG2Q9UNQ0 655 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 PDE10AQ9Y233 779 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 COL4A6Q14031 1691 aa12.37□□□□□ -0.43
CLIC4-202ENST00000488683 MYO1GB0I1T2 1018 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 HOXA2O43364 376 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 WDR47O94967 919 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 ALDH1A1P00352 501 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 EPB42P16452 691 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 ALDH3A2P51648 485 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 GTF2H3Q13889 308 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 XAF1Q6GPH4 301 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 LAIR1Q6GTX8 287 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 Q6ZNB5 142 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 ZDHHC13Q8IUH4 622 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 C8orf4Q9NR00 106 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 FAM118AQ9NWS6 357 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 HCFC1R1Q9NWW0 138 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 WARS2Q9UGM6 360 aaKnown RBP12.36□□□□□ -0.43
CLIC4-202ENST00000488683 EIF3LQ9Y262 564 aaKnown RBP12.36□□□□□ -0.43
CLIC4-202ENST00000488683 ELOVL7A1L3X0 281 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 K7EPI3 171 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 RGS14O43566 566 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 TULP3O75386 442 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 STK16O75716 305 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 INMTO95050 263 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 GBAP04062 536 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 FMO3P31513 532 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 PTSQ03393 145 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 TSTA3Q13630 321 aaPredicted RBP12.36□□□□□ -0.43
CLIC4-202ENST00000488683 DPY19L1Q2PZI1 675 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 CYP27C1Q4G0S4 372 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 USP39Q53GS9 565 aaKnown RBP12.36□□□□□ -0.43
CLIC4-202ENST00000488683 ASTLQ6HA08 431 aaPredicted RBP12.36□□□□□ -0.43
CLIC4-202ENST00000488683 DOK6Q6PKX4 331 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 UBE2R2Q712K3 238 aaPredicted RBP12.36□□□□□ -0.43
CLIC4-202ENST00000488683 CLECL1Q8IZS7 167 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 P2RY13Q9BPV8 354 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 CLMPQ9H6B4 373 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 PARVBQ9HBI1 364 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 PCDH12Q9NPG4 1184 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 HECAQ9UBI9 543 aaPredicted RBP12.36□□□□□ -0.43
CLIC4-202ENST00000488683 ZNF451Q9Y4E5 1061 aa12.36□□□□□ -0.43
CLIC4-202ENST00000488683 BOLA2-SMG1P6H3BVE0 249 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 YY2O15391 372 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 DEAF1O75398 565 aaPredicted RBP12.35□□□□□ -0.43
CLIC4-202ENST00000488683 CREG1O75629 220 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 FTH1P02794 183 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 AKT1P31749 480 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 MAP2K4P45985 399 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 HTRA3P83110 453 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 CD47Q08722 323 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 PTCHD3Q3KNS1 767 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 CARD16Q5EG05 197 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 PRR23BQ6ZRT6 265 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 Q6ZVU0 165 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 CEP68Q76N32 757 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 TRIM46Q7Z4K8 759 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 NECAB2Q7Z6G3 386 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 NXPE1Q8N323 547 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 DRAXINQ8NBI3 349 aaPredicted RBP12.35□□□□□ -0.43
CLIC4-202ENST00000488683 CCDC115Q96NT0 180 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 OSBPL6Q9BZF3 934 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 ARMC7Q9H6L4 198 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 IL21Q9HBE4 155 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 HMX1Q9NP08 348 aaPredicted RBP12.35□□□□□ -0.43
CLIC4-202ENST00000488683 LMCD1Q9NZU5 365 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 PRUNE2Q8WUY3 3088 aa12.35□□□□□ -0.43
CLIC4-202ENST00000488683 CCDC88CQ9P219 2028 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms