RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 LINC00303Q3SY05 128 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 HP1BP3Q5SSJ5 553 aaPredicted RBP13.71□□□□□ -0.21
COL9A2-208ENST00000488463 DUPD1Q68J44 220 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 C6orf15Q6UXA7 325 aaPredicted RBP13.71□□□□□ -0.21
COL9A2-208ENST00000488463 CYHR1Q6ZMK1 362 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 GALNT7Q86SF2 657 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 FAM20CQ8IXL6 584 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 C19orf47Q8N9M1 422 aaKnown RBP13.71□□□□□ -0.21
COL9A2-208ENST00000488463 LSM14AQ8ND56 463 aaKnown RBP13.71□□□□□ -0.21
COL9A2-208ENST00000488463 OR8K5Q8NH50 307 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 CD200R1Q8TD46 325 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 CALML6Q8TD86 181 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 LRRC39Q96DD0 335 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 CERS2Q96G23 380 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 WBP1Q96G27 269 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 ERP44Q9BS26 406 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 FAM167BQ9BTA0 163 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 AARSD1Q9BTE6 412 aaKnown RBP13.71□□□□□ -0.21
COL9A2-208ENST00000488463 TRIM31Q9BZY9 425 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 SYTL2Q9HCH5 934 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 SOHLH2Q9NX45 425 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 GRHL1Q9NZI5 618 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 SLC17A6Q9P2U8 582 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 LNPEPQ9UIQ6 1025 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 SNX24Q9Y343 169 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 DHRS7Q9Y394 339 aa13.71□□□□□ -0.21
COL9A2-208ENST00000488463 MYO18BQ8IUG5 2567 aa13.71□□□□□ -0.22
COL9A2-208ENST00000488463 ANKRD12Q6UB98 2062 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 A0A0J9YY10 115 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 A0A1W2PPV9 198 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 FAM187AA6NFU0 413 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 ARHGEF33A8MVX0 844 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 AHSGP02765 367 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 TUBB4AP04350 444 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 NTRK1P04629 796 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 CTSBP07858 339 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 CCNFP41002 786 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 ARL4DP49703 201 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 C2orf54Q08AI8 447 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 CYP2A13Q16696 494 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 KLHL38Q2WGJ6 581 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 TMTC4Q5T4D3 741 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 TEDDM1Q5T9Z0 273 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 CYB5D1Q6P9G0 228 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 NEK10Q6ZWH5 1172 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 DNAJC22Q8N4W6 341 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 C2orf73Q8N5S3 287 aaPredicted RBP13.7□□□□□ -0.22
COL9A2-208ENST00000488463 RAD51AP1Q96B01 352 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 GPR21Q99679 349 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 GPN2Q9H9Y4 310 aaPredicted RBP13.7□□□□□ -0.22
COL9A2-208ENST00000488463 WDR70Q9NW82 654 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 ZC3H7BQ9UGR2 993 aaKnown RBP13.7□□□□□ -0.22
COL9A2-208ENST00000488463 CHMP2BQ9UQN3 213 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 PCDHB3Q9Y5E6 796 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 MRPS18BQ9Y676 258 aaKnown RBP13.7□□□□□ -0.22
COL9A2-208ENST00000488463 COMMD10Q9Y6G5 202 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 FLNCQ14315 2725 aa13.7□□□□□ -0.22
COL9A2-208ENST00000488463 E5RI56 91 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 GFYI3L273 518 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 TK2O00142 265 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 MYO1CO00159 1063 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 NKX2-8O15522 239 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 KDM1AO60341 852 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 SCRG1O75711 98 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 C1QL1O75973 258 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 ITGB2P05107 769 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 RORAP35398 523 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 CDKN2DP55273 166 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 ARL4CP56559 192 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 GPS2Q13227 327 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 CUL1Q13616 776 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 RBM20Q5T481 1227 aaKnown RBP13.69□□□□□ -0.22
COL9A2-208ENST00000488463 KIAA0408Q6ZU52 694 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 FBXO15Q8NCQ5 510 aaPredicted RBP13.69□□□□□ -0.22
COL9A2-208ENST00000488463 ASB11Q8WXH4 323 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 INPP5DQ92835 1189 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 TCTN2Q96GX1 697 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 RUFY1Q96T51 708 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 LHX9Q9NQ69 397 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 MOCS1Q9NZB8 636 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 WHRNQ9P202 907 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 TSR3Q9UJK0 312 aaKnown RBP13.69□□□□□ -0.22
COL9A2-208ENST00000488463 CROTQ9UKG9 612 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 PCDHGA6Q9Y5G7 932 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 KLK4Q9Y5K2 254 aa13.69□□□□□ -0.22
COL9A2-208ENST00000488463 FLNBO75369 2602 aaKnown RBP13.68□□□□□ -0.22
COL9A2-208ENST00000488463 ISM1B1AKI9 464 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 TMEM150CB9EJG8 249 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 MT-ND3P03897 115 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 CAPN1P07384 714 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 MPC1LP0DKB6 136 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 MAGP20916 626 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 GCGRP47871 477 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 CARSP49589 748 aaKnown RBP13.68□□□□□ -0.22
COL9A2-208ENST00000488463 YBX1P67809 324 aaKnown RBP13.68□□□□□ -0.22
COL9A2-208ENST00000488463 FASTKQ14296 549 aaKnown RBP13.68□□□□□ -0.22
COL9A2-208ENST00000488463 TRADDQ15628 312 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 TBR1Q16650 682 aa13.68□□□□□ -0.22
COL9A2-208ENST00000488463 CRTC2Q53ET0 693 aaPredicted RBP13.68□□□□□ -0.22
COL9A2-208ENST00000488463 ZNF385CQ66K41 422 aaPredicted RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms