RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 ANKS6Q68DC2 871 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 CAPN13Q6MZZ7 669 aaPredicted RBP13.9□□□□□ -0.18
RER1-207ENST00000488353 SCIMPQ6UWF3 145 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 FNDC5Q8NAU1 212 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 ATAD1Q8NBU5 361 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 OR52E4Q8NGH9 312 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 ARRDC2Q8TBH0 407 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 HHIPL1Q96JK4 782 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 ATOH8Q96SQ7 321 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 APOL4Q9BPW4 351 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 ZBED2Q9BTP6 218 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 CLPBQ9H078 707 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 NUAK2Q9H093 628 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 TFB2MQ9H5Q4 396 aaKnown RBP13.9□□□□□ -0.18
RER1-207ENST00000488353 FBXL12Q9NXK8 326 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 UTS2RQ9UKP6 389 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 ERVW-1Q9UQF0 538 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 INVSQ9Y283 1065 aa13.9□□□□□ -0.18
RER1-207ENST00000488353 NCF1BA6NI72 391 aaPredicted RBP13.89□□□□□ -0.19
RER1-207ENST00000488353 NCF1CA8MVU1 366 aaPredicted RBP13.89□□□□□ -0.19
RER1-207ENST00000488353 FAM25AB3EWG3 89 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 FAM25CB3EWG5 89 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 FAM25GB3EWG6 89 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 IFRD1O00458 451 aaPredicted RBP13.89□□□□□ -0.19
RER1-207ENST00000488353 FAM20BO75063 409 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 EOMESO95936 686 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 UROSP10746 265 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 NCF1P14598 390 aaPredicted RBP13.89□□□□□ -0.19
RER1-207ENST00000488353 FDXRP22570 491 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 IGFBP5P24593 272 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 ACVRL1P37023 503 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 DDOSTP39656 456 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 PBX3P40426 434 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 GALK2Q01415 458 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 C19orf57Q0VDD7 668 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 SIM2Q14190 667 aaPredicted RBP13.89□□□□□ -0.19
RER1-207ENST00000488353 C6orf136Q5SQH8 315 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 SNAP47Q5SQN1 464 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 LHX8Q68G74 356 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 SIX5Q8N196 739 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 BEND7Q8N7W2 519 aaPredicted RBP13.89□□□□□ -0.19
RER1-207ENST00000488353 FAM162AQ96A26 154 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 RHBDF1Q96CC6 855 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 FAM193BQ96PV7 902 aaPredicted RBP13.89□□□□□ -0.19
RER1-207ENST00000488353 EHD3Q9NZN3 535 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 FAM50BQ9Y247 325 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 PRELID1Q9Y255 219 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 TLR6Q9Y2C9 796 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 ACTL7AQ9Y615 435 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 U3KQV3 271 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 PATJQ8NI35 1801 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 FRMPD3Q5JV73 1810 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 SUPT3HB4E1H0 165 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 MUSKO15146 869 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 INPPL1O15357 1258 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 ICMTO60725 284 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 INHAP05111 366 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 LCKP06239 509 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 DBTP11182 482 aaKnown RBP13.89□□□□□ -0.19
RER1-207ENST00000488353 RHOQP17081 205 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 PFKLP17858 780 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 MSH3P20585 1137 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 PPP3CCP48454 512 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 PLA2G4EQ3MJ16 856 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 FBXL22Q6P050 247 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 FBXO39Q8N4B4 442 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 SPERTQ8NA61 448 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 IPCEF1Q8WWN9 437 aaPredicted RBP13.89□□□□□ -0.19
RER1-207ENST00000488353 C1orf74Q96LT6 269 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 CDADC1Q9BWV3 514 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 IRF2BPLQ9H1B7 796 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 MAGIXQ9H6Y5 334 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 PRDM5Q9NQX1 630 aaPredicted RBP13.89□□□□□ -0.19
RER1-207ENST00000488353 ADPRHL2Q9NX46 363 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 RAPGEFL1Q9UHV5 662 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 GRIP1Q9Y3R0 1128 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 PEX16Q9Y5Y5 336 aa13.89□□□□□ -0.19
RER1-207ENST00000488353 LOC105371267A0A1B0GV96 52 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 MOXD2PA6NHM9 499 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 WASH4PA8MWX3 477 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 SCELO95171 688 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 ZNF37AP17032 561 aaPredicted RBP13.88□□□□□ -0.19
RER1-207ENST00000488353 HOXB6P17509 224 aaKnown RBP13.88□□□□□ -0.19
RER1-207ENST00000488353 GBX1Q14549 363 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 TYSND1Q2T9J0 566 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 CEP78Q5JTW2 689 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 HABP4Q5JVS0 413 aaKnown RBP13.88□□□□□ -0.19
RER1-207ENST00000488353 FAM171A1Q5VUB5 890 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 LAIR1Q6GTX8 287 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 NEK5Q6P3R8 708 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 ZNF683Q8IZ20 524 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 NLGN4XQ8N0W4 816 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 ZNF548Q8NEK5 533 aaPredicted RBP13.88□□□□□ -0.19
RER1-207ENST00000488353 OR2T11Q8NH01 316 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 FCGR1BQ92637 280 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 PDLIM5Q96HC4 596 aaKnown RBP13.88□□□□□ -0.19
RER1-207ENST00000488353 ST6GAL2Q96JF0 529 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 AASSQ9UDR5 926 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 IKZF3Q9UKT9 509 aa13.88□□□□□ -0.19
RER1-207ENST00000488353 PKP3Q9Y446 797 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms