RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 KRTAP10-3P60369 221 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 PRKCZQ05513 592 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 PPIGQ13427 754 aaKnown RBP eCLIP2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 ITGA7Q13683 1181 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 ZNF273Q14593 569 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 CCDC6Q16204 474 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 ITPRIPL2Q3MIP1 535 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 UGT3A2Q3SY77 523 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 LBHQ53QV2 105 aaPredicted RBP2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 ELFN2Q5R3F8 820 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 RBMS3Q6XE24 437 aaKnown RBP2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 TRPT1Q86TN4 253 aaKnown RBP2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 VSIG1Q86XK7 387 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 MMD2Q8IY49 270 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 CCAR2Q8N163 923 aaKnown RBP2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 LMNTD1Q8N9Z9 388 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 THAP8Q8NA92 274 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 KBTBD8Q8NFY9 601 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 ROBO4Q8WZ75 1007 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 PIGBQ92521 554 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 TAF15Q92804 592 aaKnown RBP eCLIP2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 DHX58Q96C10 678 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 ZNF653Q96CK0 615 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 STAMBPL1Q96FJ0 436 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 SIPA1Q96FS4 1042 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 FAM20AQ96MK3 541 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 LRRC3BQ96PB8 259 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 PGLYRP2Q96PD5 576 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 FNBP1Q96RU3 617 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 RAD9AQ99638 391 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 CCDC3Q9BQI4 270 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 PIGQQ9BRB3 760 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 RHNO1Q9BSD3 238 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 SLC25A23Q9BV35 468 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 KATNB1Q9BVA0 655 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 SLC2A11Q9BYW1 496 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 ZBTB20Q9HC78 741 aaPredicted RBP2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 DNAJC4Q9NNZ3 241 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 ANAPC5Q9UJX4 755 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 SLC7A7Q9UM01 511 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 WDR83OSQ9Y284 106 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 NME7Q9Y5B8 376 aa2.62□□□□□ -1.99
R3HDM1-219ENST00000488035 LOC101059948A0A1B0GTJ6 334 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 FAM172BPA6NC97 362 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 ANTXRLA6NF34 631 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 ZNF197O14709 1029 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 CLIC2O15247 247 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 DDHD2O94830 711 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 NGFP01138 241 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 CSN3P07498 182 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 CD48P09326 243 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 FDPSP14324 419 aaKnown RBP2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 LIFP15018 202 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 ERCC2P18074 760 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 SLC6A6P31641 620 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 MNDAP41218 407 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 PRKCIP41743 596 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 PDX1P52945 283 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 LIMK1P53667 647 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 PPARDQ03181 441 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 TAF10Q12962 218 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 VEZF1Q14119 521 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 ACCSLQ4AC99 568 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 SLC25A53Q5H9E4 307 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 TCTE1Q5JU00 501 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 CCNYL2Q5T2Q4 361 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 ADAM5Q6NVV9 412 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 CAVIN1Q6NZI2 390 aaKnown RBP2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 DCLRE1AQ6PJP8 1040 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 DET1Q7L5Y6 550 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 CCDC186Q7Z3E2 898 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 DNAJB7Q7Z6W7 309 aaPredicted RBP2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 ZNF554Q86TJ5 538 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 ISCA2Q86U28 154 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 TLK2Q86UE8 772 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 RTN4RL2Q86UN3 420 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 STPG4Q8N801 248 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 DBF4BQ8NFT6 615 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 VANGL1Q8TAA9 524 aaPredicted RBP2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 TM9SF4Q92544 642 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 EXT2Q93063 718 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 MOB3AQ96BX8 217 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 SPATA33Q96N06 139 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 SHARPINQ9H0F6 387 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 Q9H8V8 135 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 SIX2Q9NPC8 291 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 SDR39U1Q9NRG7 319 aaPredicted RBP2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 GKN1Q9NS71 199 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 MRGBPQ9NV56 204 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 COQ3Q9NZJ6 369 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 ZNF624Q9P2J8 865 aaPredicted RBP2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 CACNG4Q9UBN1 327 aa2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 CPSF3Q9UKF6 684 aaKnown RBP2.61□□□□□ -1.99
R3HDM1-219ENST00000488035 PRR23AA6NEV1 266 aa2.6□□□□□ -1.99
R3HDM1-219ENST00000488035 FAM86B1E9PN63 330 aa2.6□□□□□ -1.99
R3HDM1-219ENST00000488035 CCL24O00175 119 aa2.6□□□□□ -1.99
R3HDM1-219ENST00000488035 CLDN4O14493 209 aa2.6□□□□□ -1.99
R3HDM1-219ENST00000488035 RNASEH1O60930 286 aaKnown RBP2.6□□□□□ -1.99
R3HDM1-219ENST00000488035 NADKO95544 446 aaPredicted RBP2.6□□□□□ -1.99
R3HDM1-219ENST00000488035 GSRP00390 522 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms