RNA–Protein interactions for RNA: ENST00000487062.1

SF3A3-206, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 775 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-206ENST00000487062 LILRA3Q8N6C8 439 aaPredicted RBP6.86□□□□□ -1.31
SF3A3-206ENST00000487062 POU5F2Q8N7G0 328 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 PHC3Q8NDX5 983 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 FLCNQ8NFG4 579 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 OR9A1PQ8NGU1 263 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 HMGB4Q8WW32 186 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 COL26A1Q96A83 441 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 RAD51AP1Q96B01 352 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 PPP3R2Q96LZ3 170 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 PKP4Q99569 1192 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 TIMM29Q9BSF4 260 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 RTKNQ9BST9 563 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 LGR4Q9BXB1 951 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 TBC1D10AQ9BXI6 508 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 RBCK1Q9BYM8 510 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 ATG10Q9H0Y0 220 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 OR52A5Q9H2C5 316 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 ZNF385DQ9H6B1 395 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 LMAN1LQ9HAT1 526 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 SLC40A1Q9NP59 571 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 NDE1Q9NXR1 346 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 TAS2R1Q9NYW7 299 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 STOX2Q9P2F5 926 aaPredicted RBP6.86□□□□□ -1.31
SF3A3-206ENST00000487062 WNT16Q9UBV4 365 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 KLQ9UEF7 1012 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 POLG2Q9UHN1 485 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 MOSPD1Q9UJG1 213 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 ZNF225Q9UK10 706 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 FBXL21Q9UKT6 434 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 CA14Q9ULX7 337 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 SNX6Q9UNH7 406 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 ASF1AQ9Y294 204 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 OR1A2Q9Y585 309 aa6.86□□□□□ -1.31
SF3A3-206ENST00000487062 COPG1Q9Y678 874 aaKnown RBP6.86□□□□□ -1.31
SF3A3-206ENST00000487062 C5orf42Q9H799 3197 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 PCM1Q15154 2024 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 LOC100653049A0A140TA62 436 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 A0A1B0GTL3 188 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 KANSL1LA0AUZ9 987 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 PSMD12O00232 456 aaPredicted RBP6.85□□□□□ -1.31
SF3A3-206ENST00000487062 GSC2O15499 205 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 KDM1AO60341 852 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 PEX11AO75192 247 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 ZNF217O75362 1048 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 KRT34O76011 436 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 APBB3O95704 486 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 SEMA4FO95754 770 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 IGLV3-19P01714 112 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 CEACAM5P06731 702 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 KRT16P08779 473 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 SLC35G4P0C7Q5 338 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 IDO1P14902 403 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 PCSK2P16519 638 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 IDSP22304 550 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 ITPKAP23677 461 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 CCND1P24385 295 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 HTR1BP28222 390 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 ACADLP28330 430 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 IMPA1P29218 277 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 ACSL1P33121 698 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 HSD17B2P37059 387 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 HNF4AP41235 474 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 HALP42357 657 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 MRPL19P49406 292 aaKnown RBP6.85□□□□□ -1.31
SF3A3-206ENST00000487062 ACADVLP49748 655 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 CCR5P51681 352 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 PNLIPRP1P54315 467 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 STARD6P59095 220 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 PFN3P60673 137 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 YPEL5P62699 121 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 ERVK-8P63133 956 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 ELF3P78545 371 aaPredicted RBP6.85□□□□□ -1.31
SF3A3-206ENST00000487062 IRF8Q02556 426 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 NAE1Q13564 534 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 CUL3Q13618 768 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 NFATC4Q14934 902 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 UBXN2BQ14CS0 331 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 ATP6AP1LQ52LC2 224 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 AGKQ53H12 422 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 XKR7Q5GH72 579 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.85□□□□□ -1.31
SF3A3-206ENST00000487062 C6orf163Q5TEZ5 329 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 METRNLQ641Q3 311 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 CAPN13Q6MZZ7 669 aaPredicted RBP6.85□□□□□ -1.31
SF3A3-206ENST00000487062 C16orf89Q6UX73 402 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 LPCAT2Q7L5N7 544 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 CHST15Q7LFX5 561 aaPredicted RBP6.85□□□□□ -1.31
SF3A3-206ENST00000487062 THOC6Q86W42 341 aaKnown RBP6.85□□□□□ -1.31
SF3A3-206ENST00000487062 SNX32Q86XE0 403 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 DCUN1D3Q8IWE4 304 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 ADHFE1Q8IWW8 467 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 SYTL1Q8IYJ3 562 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 MIER2Q8N344 545 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 DEFB123Q8N688 67 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 L3MBTL4Q8NA19 623 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 RBM15BQ8NDT2 890 aaKnown RBP6.85□□□□□ -1.31
SF3A3-206ENST00000487062 TSTD1Q8NFU3 115 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 OR56A3Q8NH54 315 aa6.85□□□□□ -1.31
SF3A3-206ENST00000487062 SETD7Q8WTS6 366 aaKnown RBP6.85□□□□□ -1.31
SF3A3-206ENST00000487062 TFGQ92734 400 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms