RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 KIAA1522Q9P206 1035 aaPredicted RBP12.11□□□□□ -0.47
HSPG2-211ENST00000486901 TANC1Q9C0D5 1861 aa12.11□□□□□ -0.47
HSPG2-211ENST00000486901 LOC285095A0A1B0GVY8 99 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 TULP3O75386 442 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 DNAJB1P25685 340 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 TSTA3Q13630 321 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-211ENST00000486901 XKR4Q5GH76 650 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 HORMAD1Q86X24 394 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 ARMC8Q8IUR7 673 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 BRINP2Q9C0B6 783 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 PARVBQ9HBI1 364 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 SCN3BQ9NY72 215 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 PSME4Q14997 1843 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 RFXAPO00287 272 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 AIREO43918 545 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 PRR35P0CG20 571 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 RHOQP17081 205 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 OR1E2P47887 323 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 TRAF3Q13114 568 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 TUBA3CQ13748 450 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-211ENST00000486901 VASH1Q7L8A9 365 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-211ENST00000486901 ZNF551Q7Z340 670 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-211ENST00000486901 OR8H2Q8N162 312 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 THEM5Q8N1Q8 247 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 APOLD1Q96LR9 279 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 ACBD6Q9BR61 282 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 ZIM2Q9NZV7 527 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 A0A0G2JMZ2 1700 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 LRRC37A2A6NM11 1700 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 FFAR2O15552 330 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 RGS10O43665 173 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 ULK1O75385 1050 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 SGSHP51688 502 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 SERINC3Q13530 473 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 CCDC71Q8IV32 467 aaPredicted RBP12.1□□□□□ -0.47
HSPG2-211ENST00000486901 LMNTD1Q8N9Z9 388 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 DNASE1L2Q92874 299 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 TESMINQ9Y4I5 508 aa12.1□□□□□ -0.47
HSPG2-211ENST00000486901 C2orf81A6NN90 581 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 ASNA1O43681 348 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 CCNKO75909 580 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 FGF1P05230 155 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 SERPINB10P48595 397 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 KCNC4Q03721 635 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 ILF2Q12905 390 aaKnown RBP12.09□□□□□ -0.47
HSPG2-211ENST00000486901 KLHL17Q6TDP4 642 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 DENND1CQ8IV53 801 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 UMODL1-AS1Q8N2C9 162 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 DYNC2LI1Q8TCX1 351 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 ZFYVE19Q96K21 471 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 SYT17Q9BSW7 474 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 KATNAL1Q9BW62 490 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 YTHDF1Q9BYJ9 559 aaKnown RBP12.09□□□□□ -0.47
HSPG2-211ENST00000486901 PALMDQ9NP74 551 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 KRT84Q9NSB2 600 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 GPR83Q9NYM4 423 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 UGT2A1Q9Y4X1 527 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 PRSS21Q9Y6M0 314 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 ZFP37Q9Y6Q3 630 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-211ENST00000486901 TPD52L2O43399 206 aaKnown RBP12.09□□□□□ -0.47
HSPG2-211ENST00000486901 PCDHGA12O60330 932 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 VPS4BO75351 444 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 NDST3O95803 873 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 POU1F1P28069 291 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 MRPS15P82914 257 aaKnown RBP12.09□□□□□ -0.47
HSPG2-211ENST00000486901 FAM171BQ6P995 826 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 CCBE1Q6UXH8 406 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-211ENST00000486901 TMC5Q6UXY8 1006 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 C11orf74Q86VG3 221 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 LYSMD2Q8IV50 215 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 P3H2Q8IVL5 708 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 LEMD2Q8NC56 503 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 OR5K1Q8NHB7 308 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 TTPALQ9BTX7 342 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 GPR63Q9BZJ6 419 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 SLIRPQ9GZT3 109 aaKnown RBP12.09□□□□□ -0.47
HSPG2-211ENST00000486901 ACOT13Q9NPJ3 140 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 MBLAC1A4D2B0 266 aaPredicted RBP12.09□□□□□ -0.47
HSPG2-211ENST00000486901 CTDSP2O14595 271 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 TNFRSF10BO14763 440 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 GABARAPO95166 117 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 ACPPP15309 386 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 ITIH1P19827 911 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 IFITM2Q01629 132 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 NADSYN1Q6IA69 706 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 CLECL1Q8IZS7 167 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 C2orf69Q8N8R5 385 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 TTYH2Q9BSA4 534 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 CENPOQ9BU64 300 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 RAD18Q9NS91 495 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 PADI3Q9ULW8 664 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 RAI2Q9Y5P3 530 aa12.09□□□□□ -0.47
HSPG2-211ENST00000486901 TSC2P49815 1807 aa12.08□□□□□ -0.47
HSPG2-211ENST00000486901 TRIM64BA6NI03 449 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 K7ERQ8 282 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 TAF4O00268 1085 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 ANKRD28O15084 1053 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 GUCY1B2O75343 617 aa12.08□□□□□ -0.48
HSPG2-211ENST00000486901 C7P10643 843 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms