RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 MED27Q6P2C8 311 aa10.8□□□□□ -0.68
HDAC6-228ENST00000486227 BRAT1Q6PJG6 821 aa10.8□□□□□ -0.68
HDAC6-228ENST00000486227 BTN2A2Q8WVV5 523 aa10.8□□□□□ -0.68
HDAC6-228ENST00000486227 MTMR10Q9NXD2 777 aa10.8□□□□□ -0.68
HDAC6-228ENST00000486227 LCHNA4D1U4 455 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 BOLA2-SMG1P6H3BVE0 249 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 SLC6A2P23975 617 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 STK19P49842 368 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-228ENST00000486227 C1QTNF8P60827 252 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 C1DQ13901 141 aaKnown RBP10.79□□□□□ -0.68
HDAC6-228ENST00000486227 INO80DQ53TQ3 878 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-228ENST00000486227 UBASH3BQ8TF42 649 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 OTUB2Q96DC9 234 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 NECTIN4Q96NY8 510 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 NKX2-4Q9H2Z4 354 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 CORO2BQ9UQ03 480 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 WBP11Q9Y2W2 641 aaKnown RBP10.79□□□□□ -0.68
HDAC6-228ENST00000486227 OR10H1Q9Y4A9 318 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 G3V2T6 193 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 ENO2P09104 434 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-228ENST00000486227 NCK1P16333 377 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 HOXB6P17509 224 aaKnown RBP10.79□□□□□ -0.68
HDAC6-228ENST00000486227 CD68P34810 354 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-228ENST00000486227 BHLHB9Q6PI77 547 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 XKR5Q6UX68 686 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 PAQR9Q6ZVX9 377 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 RAD51AP1Q96B01 352 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 SLC38A3Q99624 504 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 TRIM39Q9HCM9 518 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 NLE1Q9NVX2 485 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-228ENST00000486227 B4GALT6Q9UBX8 382 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 IL36AQ9UHA7 158 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 ELOVL7A1L3X0 281 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 J3QRK9 145 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 RHOP08100 348 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 HOXB2P14652 356 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 PPIBP23284 216 aaKnown RBP10.79□□□□□ -0.68
HDAC6-228ENST00000486227 SLC26A3P40879 764 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 ARSDP51689 593 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 PKDCCQ504Y2 493 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 FBXL8Q96CD0 374 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 ISOC1Q96CN7 298 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 NODALQ96S42 347 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 PRRG3Q9BZD7 231 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 MARCH4Q9P2E8 410 aaPredicted RBP10.79□□□□□ -0.68
HDAC6-228ENST00000486227 ZNF221Q9UK13 617 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 A0A1W2PPW3 197 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 STX16-NPEPL1H3BU86 382 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 SUV39H1O43463 412 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 TSC22D2O75157 780 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 ADAMTS4O75173 837 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 PSMA3P25788 255 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 ASMTP46597 345 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 CLK3P49761 638 aaKnown RBP10.79□□□□□ -0.68
HDAC6-228ENST00000486227 RPS14P62263 151 aaKnown RBP10.79□□□□□ -0.68
HDAC6-228ENST00000486227 ERVK-8P63133 956 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 BNC1Q01954 994 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 GPAT3Q53EU6 434 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 TRIQKQ629K1 86 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 STEAP4Q687X5 459 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 ALKAL1Q6UXT8 129 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 CYS1Q717R9 158 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 ZNF605Q86T29 641 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 OR9I1Q8NGQ6 314 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 OR10A6Q8NH74 314 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 KIAA1191Q96A73 305 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 SLC47A1Q96FL8 570 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 RPRD1BQ9NQG5 326 aaKnown RBP10.79□□□□□ -0.68
HDAC6-228ENST00000486227 ENOPH1Q9UHY7 261 aa10.79□□□□□ -0.68
HDAC6-228ENST00000486227 COL4A1P02462 1669 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 OR1I1O60431 355 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 LMAN2Q12907 356 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 GRM2Q14416 872 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 NCF4Q15080 339 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 ZNF423Q2M1K9 1284 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 INAVAQ3KP66 663 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 ZNF776Q68DI1 518 aaPredicted RBP10.78□□□□□ -0.68
HDAC6-228ENST00000486227 Q6ZVL8 140 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 NEK10Q6ZWH5 1172 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 SIX5Q8N196 739 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 LCN9Q8WX39 176 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 ITPKCQ96DU7 683 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 MCMBPQ9BTE3 642 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 BTBD1Q9H0C5 482 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 NSUN3Q9H649 340 aaKnown RBP10.78□□□□□ -0.68
HDAC6-228ENST00000486227 HCSTQ9UBK5 93 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 PDE10AQ9Y233 779 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 PCDHGA11Q9Y5H2 935 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 LAMB1P07942 1786 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 K7ERQ8 282 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 PRPS2P11908 318 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 FOSL2P15408 326 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 C4BPBP20851 252 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 COPZ1P61923 177 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 NDUFA9Q16795 377 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 ZFP69Q49AA0 526 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 TYW3Q6IPR3 259 aaKnown RBP10.78□□□□□ -0.68
HDAC6-228ENST00000486227 BEND5Q7L4P6 421 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 NRSN1Q8IZ57 195 aa10.78□□□□□ -0.68
HDAC6-228ENST00000486227 C12orf76Q8N812 135 aaPredicted RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms