RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 TSPYL1Q9H0U9 437 aa9.52□□□□□ -0.89
SND1-213ENST00000486037 SLC25A51Q9H1U9 297 aa9.52□□□□□ -0.89
SND1-213ENST00000486037 NOD2Q9HC29 1040 aa9.52□□□□□ -0.89
SND1-213ENST00000486037 MCCC2Q9HCC0 563 aa9.52□□□□□ -0.89
SND1-213ENST00000486037 SLC40A1Q9NP59 571 aa9.52□□□□□ -0.89
SND1-213ENST00000486037 UBP1Q9NZI7 540 aa9.52□□□□□ -0.89
SND1-213ENST00000486037 VPS18Q9P253 973 aa9.52□□□□□ -0.89
SND1-213ENST00000486037 SH3BGRL2Q9UJC5 107 aa9.52□□□□□ -0.89
SND1-213ENST00000486037 TTLL3Q9Y4R7 772 aa9.52□□□□□ -0.89
SND1-213ENST00000486037 JMJD1CQ15652 2540 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 TMEM200CA6NKL6 621 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 KIAA1324LA8MWY0 1029 aaPredicted RBP9.51□□□□□ -0.89
SND1-213ENST00000486037 PCDH17O14917 1159 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 EIF3HO15372 352 aaKnown RBP eCLIP9.51□□□□□ -0.89
SND1-213ENST00000486037 RIPK2O43353 540 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 GRID2O43424 1007 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 ATP8B1O43520 1251 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 WISP2O76076 250 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 MT-CYBP00156 380 aaPredicted RBP9.51□□□□□ -0.89
SND1-213ENST00000486037 PDHA1P08559 390 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 ZNF8P17098 575 aaPredicted RBP9.51□□□□□ -0.89
SND1-213ENST00000486037 RPL10P27635 214 aaKnown RBP9.51□□□□□ -0.89
SND1-213ENST00000486037 GEMP55040 296 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 CDK16Q00536 496 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 ITKQ08881 620 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 PRPSAP1Q14558 356 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 RFTN1Q14699 578 aaPredicted RBP9.51□□□□□ -0.89
SND1-213ENST00000486037 ZNF169Q14929 603 aaPredicted RBP9.51□□□□□ -0.89
SND1-213ENST00000486037 NCF4Q15080 339 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 BBS9Q3SYG4 887 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 ZNF789Q5FWF6 425 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 ALG1LQ6GMV1 187 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 LRRC8BQ6P9F7 803 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 CEP128Q6ZU80 1094 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 TRMT10CQ7L0Y3 403 aaKnown RBP9.51□□□□□ -0.89
SND1-213ENST00000486037 PRIMA1Q86XR5 153 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 RAB43Q86YS6 212 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 TGIF2LYQ8IUE0 185 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 PHYKPLQ8IUZ5 450 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 PDIK1LQ8N165 341 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 CLEC1AQ8NC01 280 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 OR52K1Q8NGK4 314 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 GPR150Q8NGU9 434 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 DNAJB14Q8TBM8 379 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 PPP4R1Q8TF05 950 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 PIH1D2Q8WWB5 315 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 TM9SF4Q92544 642 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 TADA1Q96BN2 335 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 SCRN2Q96FV2 425 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 CNDP1Q96KN2 507 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 SIGLEC10Q96LC7 697 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 ZIM3Q96PE6 472 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 PSKH2Q96QS6 385 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 MGME1Q9BQP7 344 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 FICDQ9BVA6 458 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 RAB33BQ9H082 229 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 VIPAS39Q9H9C1 493 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 XAB2Q9HCS7 855 aaKnown RBP9.51□□□□□ -0.89
SND1-213ENST00000486037 OLAHQ9NV23 265 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 PIH1D1Q9NWS0 290 aaKnown RBP9.51□□□□□ -0.89
SND1-213ENST00000486037 ATXN10Q9UBB4 475 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 DNAJC16Q9Y2G8 782 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 NFS1Q9Y697 457 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 TEX264Q9Y6I9 313 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 CSPG4Q6UVK1 2322 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 RTTNQ86VV8 2226 aa9.51□□□□□ -0.89
SND1-213ENST00000486037 FN1P02751 2386 aaKnown RBP9.5□□□□□ -0.89
SND1-213ENST00000486037 PCM1Q15154 2024 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 ERI2A8K979 691 aaKnown RBP9.5□□□□□ -0.89
SND1-213ENST00000486037 AGPSO00116 658 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 PSMD3O43242 534 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 LDB2O43679 373 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 NUAK1O60285 661 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 SOCS5O75159 536 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 CNOT3O75175 753 aaKnown RBP9.5□□□□□ -0.89
SND1-213ENST00000486037 PMPCBO75439 489 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 ANXA9O76027 345 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 PGLSO95336 258 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 SHBGP04278 402 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 KLK3P07288 261 aaPredicted RBP9.5□□□□□ -0.89
SND1-213ENST00000486037 MLNP12872 115 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 KLK2P20151 261 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 ADRA1AP35348 466 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 ELK3P41970 407 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 CD86P42081 329 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 CLCNKAP51800 687 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 STC1P52823 247 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 ZNF385CQ66K41 422 aaPredicted RBP9.5□□□□□ -0.89
SND1-213ENST00000486037 CYB5D1Q6P9G0 228 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 CRTC3Q6UUV7 619 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 IGFL2Q6UWQ7 119 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 NCCRP1Q6ZVX7 275 aaPredicted RBP9.5□□□□□ -0.89
SND1-213ENST00000486037 Q71RC1 249 aaPredicted RBP9.5□□□□□ -0.89
SND1-213ENST00000486037 BPHLQ86WA6 291 aaPredicted RBP9.5□□□□□ -0.89
SND1-213ENST00000486037 CEP97Q8IW35 865 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 ZBED8Q8IZ13 594 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 MPP5Q8N3R9 675 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 AVL9Q8NBF6 648 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 FBXO36Q8NEA4 188 aa9.5□□□□□ -0.89
SND1-213ENST00000486037 CATSPER1Q8NEC5 780 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms