RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 RAB42Q8N4Z0 105 aa17.03■□□□□ 0.32
COL6A1-204ENST00000486023 ZBTB2Q8N680 514 aa17.03■□□□□ 0.32
COL6A1-204ENST00000486023 FLVCR1-AS1Q8TAF5 88 aa17.03■□□□□ 0.32
COL6A1-204ENST00000486023 RAD51AP1Q96B01 352 aa17.03■□□□□ 0.32
COL6A1-204ENST00000486023 SIGLEC10Q96LC7 697 aa17.03■□□□□ 0.32
COL6A1-204ENST00000486023 NAPGQ99747 312 aaPredicted RBP17.03■□□□□ 0.32
COL6A1-204ENST00000486023 SLC25A18Q9H1K4 315 aa17.03■□□□□ 0.32
COL6A1-204ENST00000486023 CCDC68Q9H2F9 335 aa17.03■□□□□ 0.32
COL6A1-204ENST00000486023 IARS2Q9NSE4 1012 aaKnown RBP17.03■□□□□ 0.32
COL6A1-204ENST00000486023 ZCWPW2A0A1B0GU75 182 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 TERTO14746 1132 aaKnown RBP17.02■□□□□ 0.32
COL6A1-204ENST00000486023 RASGRF2O14827 1237 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 C1orf105O95561 183 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 S1PR4O95977 384 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 PLA2G2AP14555 144 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 MAGP20916 626 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 PTPN4P29074 926 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 DHX9Q08211 1270 aaKnown RBP17.02■□□□□ 0.32
COL6A1-204ENST00000486023 BBS9Q3SYG4 887 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 HSP90AA5PQ58FG0 334 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 ACSBG2Q5FVE4 666 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 RNASEH2BQ5TBB1 312 aaKnown RBP17.02■□□□□ 0.32
COL6A1-204ENST00000486023 IZUMO3Q5VZ72 239 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 SYTL1Q8IYJ3 562 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 DSELQ8IZU8 1212 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 ZNF655Q8N720 491 aaPredicted RBP17.02■□□□□ 0.32
COL6A1-204ENST00000486023 ENDOVQ8N8Q3 282 aaKnown RBP17.02■□□□□ 0.32
COL6A1-204ENST00000486023 GPR87Q9BY21 358 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 LATS2Q9NRM7 1088 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 ABCF3Q9NUQ8 709 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 PCMTD2Q9NV79 361 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 POLHQ9Y253 713 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 VPS9D1Q9Y2B5 631 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 SAR1BQ9Y6B6 198 aa17.02■□□□□ 0.32
COL6A1-204ENST00000486023 BAHCC1Q9P281 2608 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 PIKFYVEQ9Y2I7 2098 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 BOD1L1Q8NFC6 3051 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 DNALI1O14645 258 aaPredicted RBP17.01■□□□□ 0.31
COL6A1-204ENST00000486023 USP1O94782 785 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 AGXTP21549 392 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 SLC1A2P43004 574 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 PTGIRP43119 386 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 MPP1Q00013 466 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 CUL1Q13616 776 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 PTK6Q13882 451 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 SLC5A12Q1EHB4 618 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 KLHL38Q2WGJ6 581 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 MLIPQ5VWP3 458 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.01■□□□□ 0.31
COL6A1-204ENST00000486023 OR2L8Q8NGY9 312 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 SLC22A18Q96BI1 424 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 PDLIM2Q96JY6 352 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 PWWP2AQ96N64 755 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 TRIM31Q9BZY9 425 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 STARD5Q9NSY2 213 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 INTS10Q9NVR2 710 aaKnown RBP17.01■□□□□ 0.31
COL6A1-204ENST00000486023 SNX7Q9UNH6 387 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 MAN2B2Q9Y2E5 1009 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 PCDHGA6Q9Y5G7 932 aa17.01■□□□□ 0.31
COL6A1-204ENST00000486023 HAUS5O94927 633 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 ZIC2O95409 532 aaPredicted RBP17■□□□□ 0.31
COL6A1-204ENST00000486023 SYF2O95926 243 aaKnown RBP17■□□□□ 0.31
COL6A1-204ENST00000486023 ERVK-10P10266 1014 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 ALAS2P22557 587 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 PSMB5P28074 263 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 CCNFP41002 786 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 PAFAH1B1P43034 410 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 DR1Q01658 176 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 SLC9A5Q14940 896 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 COLEC12Q5KU26 742 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 PAPD7Q5XG87 772 aaKnown RBP17■□□□□ 0.31
COL6A1-204ENST00000486023 PCGF5Q86SE9 256 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 KCNMB4Q86W47 210 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 CREG2Q8IUH2 290 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 MAGEC3Q8TD91 643 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 CFAP36Q96G28 342 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 ABHD17AQ96GS6 310 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 SLC30A3Q99726 388 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 MIPEPQ99797 713 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 MENTQ9BUN1 341 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 ACAT2Q9BWD1 397 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 ADNPQ9H2P0 1102 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 PPANQ9NQ55 473 aaKnown RBP17■□□□□ 0.31
COL6A1-204ENST00000486023 DHCR7Q9UBM7 475 aaKnown RBP17■□□□□ 0.31
COL6A1-204ENST00000486023 NDOR1Q9UHB4 597 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 PCYOX1Q9UHG3 505 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 PLCL2Q9UPR0 1127 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 MRFAP1Q9Y605 127 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 KCNMB2Q9Y691 235 aa17■□□□□ 0.31
COL6A1-204ENST00000486023 HBQ1P09105 142 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 CBSLP0DN79 551 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 PGAM1P18669 254 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 RORAP35398 523 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 CBSP35520 551 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 MAGEA3P43357 314 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 MRPS25P82663 173 aaKnown RBP16.99■□□□□ 0.31
COL6A1-204ENST00000486023 CHAF1BQ13112 559 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 FASTKQ14296 549 aaKnown RBP16.99■□□□□ 0.31
COL6A1-204ENST00000486023 TTLL9Q3SXZ7 439 aa16.99■□□□□ 0.31
COL6A1-204ENST00000486023 MSS51Q4VC12 460 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms