RNA–Protein interactions for RNA: ENST00000485367.5

DDX56-212, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-212ENST00000485367 IMP4Q96G21 291 aaKnown RBP10.52□□□□□ -0.73
DDX56-212ENST00000485367 CFAP36Q96G28 342 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 LRGUKQ96M69 825 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 ZNF578Q96N58 590 aaPredicted RBP10.52□□□□□ -0.73
DDX56-212ENST00000485367 GFM1Q96RP9 751 aaKnown RBP10.52□□□□□ -0.73
DDX56-212ENST00000485367 TRNAU1APQ9NX07 287 aaKnown RBP10.52□□□□□ -0.73
DDX56-212ENST00000485367 MARCOQ9UEW3 520 aaPredicted RBP10.52□□□□□ -0.73
DDX56-212ENST00000485367 ZNHIT2Q9UHR6 403 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 RNF215Q9Y6U7 377 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 CACNA1GO43497 2377 aa10.52□□□□□ -0.73
DDX56-212ENST00000485367 A0A1W2PNU3 283 aaPredicted RBP10.51□□□□□ -0.73
DDX56-212ENST00000485367 CCDC160A6NGH7 325 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 NTN3O00634 580 aaPredicted RBP10.51□□□□□ -0.73
DDX56-212ENST00000485367 GLB1P16278 677 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 AK4P27144 223 aaPredicted RBP10.51□□□□□ -0.73
DDX56-212ENST00000485367 RBMS1P29558 406 aaKnown RBP10.51□□□□□ -0.73
DDX56-212ENST00000485367 ABCG1P45844 678 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 NR2C2P49116 596 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 EMP3P54852 163 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 CTBSQ01459 385 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 DARS2Q6PI48 645 aaKnown RBP10.51□□□□□ -0.73
DDX56-212ENST00000485367 NLRP8Q86W28 1048 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 NRROSQ86YC3 692 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 METTL25Q8N6Q8 603 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 FNDC8Q8TC99 324 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 CRELD1Q96HD1 420 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 LYSMD1Q96S90 227 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 C20orf27Q9GZN8 174 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 SLC25A51Q9H1U9 297 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 LRRN3Q9H3W5 708 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 FAM83DQ9H4H8 585 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 PKD2L2Q9NZM6 624 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 TAAR2Q9P1P5 351 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 LRIT1Q9P2V4 623 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 DCDC2Q9UHG0 476 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 PLEKHM1Q9Y4G2 1056 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 AP4B1Q9Y6B7 739 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 IGSF10Q6WRI0 2623 aa10.51□□□□□ -0.73
DDX56-212ENST00000485367 A0A1W2PQM1 296 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 CCDC162PA2VCL2 907 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 PMS2P1A4D2B8 440 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 E9PBE3 544 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 PMPCBO75439 489 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 PDE5AO76074 875 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 CRTAMO95727 393 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 SLC4A1P02730 911 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 FGF1P05230 155 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 PIRTP0C851 137 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 FGF3P11487 239 aaPredicted RBP10.5□□□□□ -0.73
DDX56-212ENST00000485367 COX4I1P13073 169 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 ADSLP30566 484 aaPredicted RBP10.5□□□□□ -0.73
DDX56-212ENST00000485367 MAGEA3P43357 314 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 SPINT3P49223 89 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 IDH3AP50213 366 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 HK2P52789 917 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 PDX1P52945 283 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 MAZP56270 477 aaKnown RBP10.5□□□□□ -0.73
DDX56-212ENST00000485367 PCBP4P57723 403 aaKnown RBP10.5□□□□□ -0.73
DDX56-212ENST00000485367 LYSMD3Q7Z3D4 306 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 B3GNT8Q7Z7M8 397 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 LSM14AQ8ND56 463 aaKnown RBP10.5□□□□□ -0.73
DDX56-212ENST00000485367 SPATA22Q8NHS9 363 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 WDR36Q8NI36 951 aaKnown RBP10.5□□□□□ -0.73
DDX56-212ENST00000485367 ZDHHC1Q8WTX9 485 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 TFB1MQ8WVM0 346 aaKnown RBP10.5□□□□□ -0.73
DDX56-212ENST00000485367 OR2M4Q96R27 311 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 GLOD4Q9HC38 313 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 UBAP1Q9NZ09 502 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 APPL1Q9UKG1 709 aa10.5□□□□□ -0.73
DDX56-212ENST00000485367 CCDC187A0A096LP49 1063 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 RHPN2P1A8MT19 583 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 CXorf49A8MYA2 514 aaPredicted RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 D6RAR5 112 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 TMX2-CTNND1H3BSU7 103 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 DXOO77932 396 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 MT-CYBP00156 380 aaPredicted RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 THRAP10827 490 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 ZNF23P17027 643 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 CDH2P19022 906 aaPredicted RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 TPSB2P20231 275 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 PTPN3P26045 913 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 CDK9P50750 372 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 ERVPABLB-1P60509 514 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 TUBA4AP68366 448 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 PLOD1Q02809 727 aaPredicted RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 TPSAB1Q15661 275 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 PYCR3Q53H96 274 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 SPRED1Q7Z699 444 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 HPS6Q86YV9 775 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 GALNT13Q8IUC8 556 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 RAVER1Q8IY67 606 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 CCDC124Q96CT7 223 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 SCARF2Q96GP6 870 aaPredicted RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 COX14Q96I36 57 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 CNDP1Q96KN2 507 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 TEKT5Q96M29 485 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 ZNF778Q96MU6 729 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 TRIB3Q96RU7 358 aa10.49□□□□□ -0.73
DDX56-212ENST00000485367 EBNA1BP2Q99848 306 aaKnown RBP10.49□□□□□ -0.73
DDX56-212ENST00000485367 MRPL1Q9BYD6 325 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms