RNA–Protein interactions for RNA: ENST00000483871.6

SRSF6-202, Transcript of serine and arginine rich splicing factor 6, humanhuman

TSL 2

Gene SRSF6, Length 1,680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-202ENST00000483871 AGTR2P50052 363 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 RAB28P51157 221 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 KPNA2P52292 529 aaKnown RBP13.69□□□□□ -0.22
SRSF6-202ENST00000483871 AP1S2P56377 157 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 PFKFB4Q16877 469 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 AGTRAPQ6RW13 159 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 SYTL1Q8IYJ3 562 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 AVL9Q8NBF6 648 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 RSC1A1Q92681 617 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 MOCOSQ96EN8 888 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 CCDC3Q9BQI4 270 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 SRMSQ9H3Y6 488 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 MLXIPLQ9NP71 852 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 SSU72Q9NP77 194 aaKnown RBP13.69□□□□□ -0.22
SRSF6-202ENST00000483871 ACSS2Q9NR19 701 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 KCNK4Q9NYG8 393 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 OGFRQ9NZT2 677 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 LNPEPQ9UIQ6 1025 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 ASB1Q9Y576 335 aa13.69□□□□□ -0.22
SRSF6-202ENST00000483871 TMEM120BA0PK00 339 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 PABPN1LA6NDY0 278 aaKnown RBP13.68□□□□□ -0.22
SRSF6-202ENST00000483871 LRRC14BA6NHZ5 514 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 LILRA5A6NI73 299 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 SYCE1LA8MT33 242 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 HMGB1P1B2RPK0 211 aaPredicted RBP13.68□□□□□ -0.22
SRSF6-202ENST00000483871 E7ENX8 843 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 G3V2L1 256 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 H3BQF6 201 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 PRPF4O43172 522 aaKnown RBP eCLIP13.68□□□□□ -0.222e-19■■■■■ 27.5
SRSF6-202ENST00000483871 DLX3O60479 287 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 UBXN7O94888 489 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 ERGP11308 486 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 GFAPP14136 432 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 AMD1P17707 334 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 POLR2CP19387 275 aaPredicted RBP13.68□□□□□ -0.22
SRSF6-202ENST00000483871 PKLRP30613 574 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 PPM1FP49593 454 aaPredicted RBP13.68□□□□□ -0.22
SRSF6-202ENST00000483871 DUSP3P51452 185 aaPredicted RBP13.68□□□□□ -0.22
SRSF6-202ENST00000483871 LIMK1P53667 647 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 PNLIPRP1P54315 467 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 CDKL1Q00532 357 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 TAP2Q03519 686 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 NAE1Q13564 534 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 TSTA3Q13630 321 aaPredicted RBP13.68□□□□□ -0.22
SRSF6-202ENST00000483871 AMZ1Q400G9 498 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 CCDC153Q494R4 210 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 USP53Q70EK8 1073 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 LRRC56Q8IYG6 542 aaPredicted RBP13.68□□□□□ -0.22
SRSF6-202ENST00000483871 ADGRF3Q8IZF5 1079 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 ANKRD42Q8N9B4 389 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 DEFB124Q8NES8 71 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 OR10G6Q8NH81 332 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 SELENOSQ9BQE4 189 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 UCK1Q9HA47 277 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 INTS7Q9NVH2 962 aaKnown RBP13.68□□□□□ -0.22
SRSF6-202ENST00000483871 HRASLS2Q9NWW9 162 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 SPHK1Q9NYA1 384 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 NCKIPSDQ9NZQ3 722 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 PTBP2Q9UKA9 531 aaKnown RBP13.68□□□□□ -0.22
SRSF6-202ENST00000483871 PCM1Q15154 2024 aa13.68□□□□□ -0.22
SRSF6-202ENST00000483871 COL5A1P20908 1838 aaPredicted RBP13.67□□□□□ -0.22
SRSF6-202ENST00000483871 IGHV1OR21-1A0A087WYE8 117 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 A0A1W2PPV9 198 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 A8MT66 165 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 TM4SF5O14894 197 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 SIX3O95343 332 aaPredicted RBP13.67□□□□□ -0.22
SRSF6-202ENST00000483871 PNLIPP16233 465 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 KCNA4P22459 653 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 ACP1P24666 158 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 PEBP1P30086 187 aaKnown RBP13.67□□□□□ -0.22
SRSF6-202ENST00000483871 ETV4P43268 484 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 GPR3P46089 330 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 HSPA7P48741 367 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 PPP1CAP62136 330 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 YBX1P67809 324 aaKnown RBP13.67□□□□□ -0.22
SRSF6-202ENST00000483871 NR1D2Q14995 579 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 CYP2A13Q16696 494 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 PTCHD3Q3KNS1 767 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 CCDC157Q569K6 752 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 SPRED1Q7Z699 444 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 FAM20CQ8IXL6 584 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 FBXO39Q8N4B4 442 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 PTGR2Q8N8N7 351 aaPredicted RBP13.67□□□□□ -0.22
SRSF6-202ENST00000483871 PDPRQ8NCN5 879 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 OR6C4Q8NGE1 309 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 OR2L8Q8NGY9 312 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 MDM1Q8TC05 714 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 NCSTNQ92542 709 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 FBXL8Q96CD0 374 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 MED8Q96G25 268 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 TMEM79Q9BSE2 394 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 MECRQ9BV79 373 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 ACAT2Q9BWD1 397 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 NUDT4Q9NZJ9 180 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 SPATA7Q9P0W8 599 aa13.67□□□□□ -0.22
SRSF6-202ENST00000483871 A0A1W2PQM1 296 aa13.66□□□□□ -0.22
SRSF6-202ENST00000483871 CCDC189A1A4V9 331 aa13.66□□□□□ -0.22
SRSF6-202ENST00000483871 KLK8O60259 260 aa13.66□□□□□ -0.22
SRSF6-202ENST00000483871 PROS1P07225 676 aa13.66□□□□□ -0.22
SRSF6-202ENST00000483871 CHRM5P08912 532 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms