RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 MC4RP32245 332 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 NFYCQ13952 458 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 TBRG1Q3YBR2 411 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 Q3ZCU0 254 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 VPS26BQ4G0F5 336 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 UBE2UQ5VVX9 321 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 HMBOX1Q6NT76 420 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 NCEH1Q6PIU2 408 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 LAYNQ6UX15 382 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 DPP10Q8N608 796 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 DTX3Q8N9I9 347 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 SNX31Q8N9S9 440 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 CDC26Q8NHZ8 85 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 CANT1Q8WVQ1 401 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 TMEM125Q96AQ2 219 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 MYEOVQ96EZ4 313 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 TRMT2BQ96GJ1 504 aaKnown RBP12.21□□□□□ -0.45
LINC00477-201ENST00000483544 SH3YL1Q96HL8 342 aaPredicted RBP12.21□□□□□ -0.45
LINC00477-201ENST00000483544 NSUN5Q96P11 429 aaKnown RBP12.21□□□□□ -0.45
LINC00477-201ENST00000483544 C8orf33Q9H7E9 229 aaPredicted RBP12.21□□□□□ -0.45
LINC00477-201ENST00000483544 HEBP1Q9NRV9 189 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 PCDHGB4Q9UN71 923 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 DIMT1Q9UNQ2 313 aaKnown RBP12.21□□□□□ -0.45
LINC00477-201ENST00000483544 PKP3Q9Y446 797 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 PCDHGB5Q9Y5G0 923 aa12.21□□□□□ -0.45
LINC00477-201ENST00000483544 ZNF840PA6NDX5 716 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 CCDC154A6NI56 674 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 E5RI56 91 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 STC2O76061 302 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 OR7A10O76100 309 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 TSPAN12O95859 305 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 SFTPCP11686 197 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 BMP1P13497 986 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 ATP6V1B2P21281 511 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 HNF1BP35680 557 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 MAPK8P45983 427 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 POLR2JP52435 117 aaKnown RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 ATXN3P54252 364 aaPredicted RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 AP1S1P61966 158 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 POU6F2P78424 691 aaPredicted RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 CD83Q01151 205 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 PTPRCAPQ14761 206 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 RBBP7Q16576 425 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 ATP6AP1LQ52LC2 224 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 ANKRD39Q53RE8 183 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 NHSL2Q5HYW2 709 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 FGD3Q5JSP0 725 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 TPGS2Q68CL5 300 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 CYP2R1Q6VVX0 501 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 SYVN1Q86TM6 617 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 CFAP52Q8N1V2 620 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 FBXO22Q8NEZ5 403 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 LPCAT1Q8NF37 534 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 CD200R1Q8TD46 325 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 SH3RF2Q8TEC5 729 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 TFAP2CQ92754 450 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 ZNF512Q96ME7 567 aaPredicted RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 WACQ9BTA9 647 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 APOL5Q9BWW9 433 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 PITHD1Q9GZP4 211 aaPredicted RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 CRISPLD1Q9H336 500 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 NOL11Q9H8H0 719 aaKnown RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 BRD9Q9H8M2 597 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 OLAHQ9NV23 265 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 CMTM6Q9NX76 183 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 PAQR5Q9NXK6 330 aaPredicted RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 CD274Q9NZQ7 290 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 AFF4Q9UHB7 1163 aaKnown RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 ZNF221Q9UK13 617 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 FAM50BQ9Y247 325 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 HCN4Q9Y3Q4 1203 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 MRPL42Q9Y6G3 142 aaKnown RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 ANAPC1Q9H1A4 1944 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 CXorf51AA0A1B0GTR3 108 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 NPEPPSL1A6NEC2 478 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 CDC7O00311 574 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 PRMT5O14744 637 aaPredicted RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 ARPC2O15144 300 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 ATG13O75143 517 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 NADKO95544 446 aaPredicted RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 DBTP11182 482 aaKnown RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 CD247P20963 164 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 MYF6P23409 242 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 CORO1AP31146 461 aaKnown RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 RGS4P49798 205 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 ST13P50502 369 aaKnown RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 LBX1P52954 281 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 PTPN5P54829 565 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 FOXA1P55317 472 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 AP1S2P56377 157 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 BNC1Q01954 994 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 EMX2Q04743 252 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 PRKG2Q13237 762 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 MAD2L1Q13257 205 aaPredicted RBP12.2□□□□□ -0.46
LINC00477-201ENST00000483544 ATP6AP1Q15904 470 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 CTSL3PQ5NE16 218 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 RTP2Q5QGT7 225 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 CYP20A1Q6UW02 462 aa12.2□□□□□ -0.46
LINC00477-201ENST00000483544 SPRED1Q7Z699 444 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 121.6 ms