RNA–Protein interactions for RNA: ENST00000482251.2

CPSF4-212, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 574 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-212ENST00000482251 HOMER3Q9NSC5 361 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 SAMD15Q9P1V8 674 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.09□□□□□ -0.79
CPSF4-212ENST00000482251 TCFL5Q9UL49 500 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 SLC39A10Q9ULF5 831 aa10.09□□□□□ -0.79
CPSF4-212ENST00000482251 AP3B1O00203 1094 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 PGRMC1O00264 195 aaKnown RBP10.08□□□□□ -0.8
CPSF4-212ENST00000482251 RASGRF2O14827 1237 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 ZNF185O15231 689 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 NRP2O60462 931 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 SLCO2B1O94956 709 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 RAB40ALP0C0E4 278 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 AGXTP21549 392 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 CD9P21926 228 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 RPS3P23396 243 aaKnown RBP eCLIP10.08□□□□□ -0.8
CPSF4-212ENST00000482251 MCM3P25205 808 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 COILP38432 576 aaPredicted RBP10.08□□□□□ -0.8
CPSF4-212ENST00000482251 CASRP41180 1078 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 GRIA3P42263 894 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 CSRP3P50461 194 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 CCL11P51671 97 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 CDK16Q00536 496 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 ATP1A4Q13733 1029 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 SLC5A12Q1EHB4 618 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 TYSND1Q2T9J0 566 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 MLIPQ5VWP3 458 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 ZNF385CQ66K41 422 aaPredicted RBP10.08□□□□□ -0.8
CPSF4-212ENST00000482251 ZNF470Q6ECI4 717 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 KIAA0930Q6ICG6 404 aaPredicted RBP10.08□□□□□ -0.8
CPSF4-212ENST00000482251 CCDC137Q6PK04 289 aaKnown RBP10.08□□□□□ -0.8
CPSF4-212ENST00000482251 CAND1Q86VP6 1230 aaKnown RBP10.08□□□□□ -0.8
CPSF4-212ENST00000482251 TMEM151BQ8IW70 566 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 RASGEF1CQ8N431 466 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 METTL27Q8N6F8 245 aaPredicted RBP10.08□□□□□ -0.8
CPSF4-212ENST00000482251 OR2L8Q8NGY9 312 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 ADAMTS17Q8TE56 1095 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 SEC14L1Q92503 715 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 BIRC8Q96P09 236 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 SERPINB12Q96P63 405 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 ING2Q9H160 280 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 GRPEL1Q9HAV7 217 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 TXLNGQ9NUQ3 528 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 TRMT1Q9NXH9 659 aaKnown RBP10.08□□□□□ -0.8
CPSF4-212ENST00000482251 GALPQ9UBC7 116 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 ANAPC2Q9UJX6 822 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 JRKLQ9Y4A0 524 aa10.08□□□□□ -0.8
CPSF4-212ENST00000482251 MYO18BQ8IUG5 2567 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 A6NL46 340 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 E5RI56 91 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 H3BMH7 237 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 MASP2O00187 686 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 KIF5CO60282 957 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 PHF2O75151 1096 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 C1orf105O95561 183 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 PAMP19021 973 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 CHRM3P20309 590 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 OGNP20774 298 aaKnown RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 PGDP52209 483 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 SARNPP82979 210 aaKnown RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 KLRB1Q12918 225 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 CUL1Q13616 776 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 TSTA3Q13630 321 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 DHX34Q14147 1143 aaKnown RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 FASTKQ14296 549 aaKnown RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 SF1Q15637 639 aaKnown RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 ACSBG2Q5FVE4 666 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 RNF187Q5TA31 235 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 RHBDD2Q6NTF9 364 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 TCTN3Q6NUS6 607 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 TTC23LQ6PF05 361 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 CENPUQ71F23 418 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 SDCCAG8Q86SQ7 713 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 LRRC6Q86X45 466 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 CILP2Q8IUL8 1156 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 APLFQ8IW19 511 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 DENND6AQ8IWF6 608 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 AGGF1Q8N302 714 aaeCLIP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 DNAJC22Q8N4W6 341 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 DTWD1Q8N5C7 304 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 ZBTB2Q8N680 514 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 TEX19Q8NA77 164 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 THAP4Q8WY91 577 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 PBKQ96KB5 322 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 GBP5Q96PP8 586 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 OSBPL9Q96SU4 736 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 SLC30A3Q99726 388 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 MIPEPQ99797 713 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 SLC25A23Q9BV35 468 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 ACAT2Q9BWD1 397 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 KCNF1Q9H3M0 494 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 FBXO6Q9NRD1 293 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 EURLQ9NYK6 297 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 LUZP4Q9P127 313 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 IFT80Q9P2H3 777 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 NDOR1Q9UHB4 597 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 GPN3Q9UHW5 284 aaPredicted RBP10.07□□□□□ -0.8
CPSF4-212ENST00000482251 PLCL2Q9UPR0 1127 aa10.07□□□□□ -0.8
CPSF4-212ENST00000482251 PLAAQ9Y263 795 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms