RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 YY1P25490 414 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 PON1P27169 355 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 TKTP29401 623 aaKnown RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 RARRES1P49788 294 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 ENTPD1P49961 510 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 MTTPP55157 894 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 SOX10P56693 466 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 CLDN8P56748 225 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 EEFSECP57772 596 aaKnown RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 RPS8P62241 208 aaKnown RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 ADORA2A-AS1P86434 159 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 E2F1Q01094 437 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 RASGEF1BQ0VAM2 473 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 TRAP1Q12931 704 aaKnown RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 CSTF3Q12996 717 aaKnown RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 GPS2Q13227 327 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 PDE7AQ13946 482 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 KRT31Q15323 416 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 AASDHQ4L235 1098 aaPredicted RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 MPPE1Q53F39 396 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 FAM76BQ5HYJ3 339 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 DCST1Q5T197 706 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 TMEM63BQ5T3F8 832 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 FAM90A2PQ658T7 463 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 TMEM81Q6P7N7 255 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 DPY19L3Q6ZPD9 716 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 SLC46A3Q7Z3Q1 461 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 PRSS42Q7Z5A4 293 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 ABI3BPQ7Z7G0 1075 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 FJX1Q86VR8 437 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 SFTPA1Q8IWL2 248 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 OR4N4Q8N0Y3 316 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 PTGR2Q8N8N7 351 aaPredicted RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 HJURPQ8NCD3 748 aaPredicted RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 MAFAQ8NHW3 353 aaPredicted RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 SLC2A12Q8TD20 617 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 CCDC12Q8WUD4 166 aaPredicted RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 SLC20A1Q8WUM9 679 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 TRIB2Q92519 343 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 KIFAP3Q92845 792 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 ARRDC3Q96B67 414 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 RASD2Q96D21 266 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 HES6Q96HZ4 224 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 FAM71F1Q96KD3 344 aaPredicted RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 ZNF583Q96ND8 569 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 OR2A14Q96R47 310 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 PANX1Q96RD7 426 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 CDRT15Q96T59 188 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 PCYT2Q99447 389 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 CITED1Q99966 193 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 RBM4BQ9BQ04 359 aaKnown RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 BPIFA3Q9BQP9 254 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 PIGQQ9BRB3 760 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 THAP7Q9BT49 309 aaPredicted RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 RBM4Q9BWF3 364 aaKnown RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 FZD8Q9H461 694 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 RIOX1Q9H6W3 641 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 AKIRIN1Q9H9L7 192 aaPredicted RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 NTN4Q9HB63 628 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 MMP25Q9NPA2 562 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 MKKSQ9NPJ1 570 aaPredicted RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 FKBP14Q9NWM8 211 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 WWOXQ9NZC7 414 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 PKD2L2Q9NZM6 624 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 HEY2Q9UBP5 337 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 TRIM10Q9UDY6 481 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 CNOT8Q9UFF9 292 aaKnown RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 KCNN3Q9UGI6 736 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 FBXW11Q9UKB1 542 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 TRPC5Q9UL62 973 aaPredicted RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 ADAMTS5Q9UNA0 930 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 ZBTB1Q9Y2K1 713 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 PPIL1Q9Y3C6 166 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 SRPRBQ9Y5M8 271 aaKnown RBP4.03□□□□□ -1.76
VPS41-212ENST00000482217 PTCH1Q13635 1447 aa4.03□□□□□ -1.76
VPS41-212ENST00000482217 TRBV2A0A0J9YWF9 115 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 KANSL1LA0AUZ9 987 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 GXYLT2A0PJZ3 443 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 OR52A4PA6NMU1 304 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 GABRR3A8MPY1 467 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 SUPT3HB4E1H0 165 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 GOLGA8MH3BSY2 632 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 AP4M1O00189 453 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 CES2O00748 559 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 ZNF197O14709 1029 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 TEX28O15482 410 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 KCNAB3O43448 404 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 DCXO43602 365 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 TBX19O60806 448 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 TGM6O95932 706 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 GH1P01241 217 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 OPN1LWP04000 364 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 HMBSP08397 361 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 ZCCHC18P0CG32 403 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 RPA2P15927 270 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 CTPS1P17812 591 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 ENGP17813 658 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 LBPP18428 481 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 MMP8P22894 467 aa4.02□□□□□ -1.77
VPS41-212ENST00000482217 DNASE1P24855 282 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms