RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 AP1M1Q9BXS5 423 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 CHRNA10Q9GZZ6 450 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 CHRAC1Q9NRG0 131 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 PADI2Q9Y2J8 665 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 AP1M2Q9Y6Q5 423 aa13.83□□□□□ -0.2
ATG4B-218ENST00000479554 CCDC151A5D8V7 595 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 IQCF5A8MTL0 148 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 PRMT5O14744 637 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-218ENST00000479554 GPC4O75487 556 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 TMEM63AO94886 807 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 PEBP1P30086 187 aaKnown RBP13.82□□□□□ -0.2
ATG4B-218ENST00000479554 PKLRP30613 574 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 CCL11P51671 97 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 CRADDP78560 199 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 SLC5A12Q1EHB4 618 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 ZNF385CQ66K41 422 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-218ENST00000479554 PTRHD1Q6GMV3 140 aaKnown RBP13.82□□□□□ -0.2
ATG4B-218ENST00000479554 UNC5DQ6UXZ4 953 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 LDB1Q86U70 411 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-218ENST00000479554 VRK3Q8IV63 474 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 DCUN1D3Q8IWE4 304 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 KRT222Q8N1A0 295 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 CFAP61Q8NHU2 1237 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 FLVCR1-AS1Q8TAF5 88 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 LRRC1Q9BTT6 524 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 DHRS4Q9BTZ2 278 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 IL22Q9GZX6 179 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 IRAK4Q9NWZ3 460 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 BFARQ9NZS9 450 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 MARCH4Q9P2E8 410 aaPredicted RBP13.82□□□□□ -0.2
ATG4B-218ENST00000479554 SRPK3Q9UPE1 567 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 CDYLQ9Y232 598 aa13.82□□□□□ -0.2
ATG4B-218ENST00000479554 DRG1Q9Y295 367 aaKnown RBP13.82□□□□□ -0.2
ATG4B-218ENST00000479554 PCDHGA9Q9Y5G4 932 aaKnown RBP13.82□□□□□ -0.2
ATG4B-218ENST00000479554 H3BMH7 237 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 AP3B1O00203 1094 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 CD3EAPO15446 510 aaKnown RBP13.81□□□□□ -0.2
ATG4B-218ENST00000479554 ZSCAN9O15535 394 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-218ENST00000479554 HCRTR1O43613 425 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 ERLIN1O75477 346 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 CBSLP0DN79 551 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 AOAHP28039 575 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 CBSP35520 551 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 GABRA4P48169 554 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 KYNUQ16719 465 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 C1orf189Q5VU69 101 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 RHBDD2Q6NTF9 364 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 RAB43Q86YS6 212 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 KLHL7Q8IXQ5 586 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 MPP5Q8N3R9 675 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 OTUD6BQ8N6M0 293 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 GSDMBQ8TAX9 411 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 PROKR1Q8TCW9 393 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 MIB2Q96AX9 1013 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 SLC22A18Q96BI1 424 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 PANX3Q96QZ0 392 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 SPRTNQ9H040 489 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-218ENST00000479554 TREX1Q9NSU2 369 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 TXLNGQ9NUQ3 528 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 GPN3Q9UHW5 284 aaPredicted RBP13.81□□□□□ -0.2
ATG4B-218ENST00000479554 GNPTGQ9UJJ9 305 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 G3BP2Q9UN86 482 aaKnown RBP13.81□□□□□ -0.2
ATG4B-218ENST00000479554 PLAAQ9Y263 795 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 SPTBP11277 2137 aa13.81□□□□□ -0.2
ATG4B-218ENST00000479554 NDUFS3O75489 264 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 ATXN8OSP0DMR3 200 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 MAGP20916 626 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 OTX2P32243 289 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 NPY2RP49146 381 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 RRADP55042 308 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 MLLT10P55197 1068 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 ATP1A4Q13733 1029 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 MLIPQ5VWP3 458 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 TLDC1Q6P9B6 456 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 TTC23LQ6PF05 361 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 MED25Q71SY5 747 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 MAATS1Q7Z4T9 603 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 MTERF4Q7Z6M4 381 aaKnown RBP13.8□□□□□ -0.2
ATG4B-218ENST00000479554 TAX1BP1Q86VP1 789 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 ATCAYQ86WG3 371 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 LRRC6Q86X45 466 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 FAM20CQ8IXL6 584 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 ZBTB2Q8N680 514 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 ZNF655Q8N720 491 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-218ENST00000479554 TMEM102Q8N9M5 508 aaPredicted RBP13.8□□□□□ -0.2
ATG4B-218ENST00000479554 LINC01555Q8NAE3 123 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 RUNDC3BQ96NL0 473 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 MENTQ9BUN1 341 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 RAB11FIP5Q9BXF6 653 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 P2RY12Q9H244 342 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 MLXIPLQ9NP71 852 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 DHCR7Q9UBM7 475 aaKnown RBP13.8□□□□□ -0.2
ATG4B-218ENST00000479554 NDOR1Q9UHB4 597 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 CIDEBQ9UHD4 219 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 PLCL2Q9UPR0 1127 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 ZNF451Q9Y4E5 1061 aa13.8□□□□□ -0.2
ATG4B-218ENST00000479554 PTPN13Q12923 2485 aa13.79□□□□□ -0.2
ATG4B-218ENST00000479554 RASGRF2O14827 1237 aa13.79□□□□□ -0.2
ATG4B-218ENST00000479554 KPNA5O15131 536 aa13.79□□□□□ -0.2
ATG4B-218ENST00000479554 PHF2O75151 1096 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms