RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TBC1D21Q8IYX1 336 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 OR13C4Q8NGS5 318 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 PSMF1Q92530 271 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 HAS2Q92819 552 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 RNF25Q96BH1 459 aaPredicted RBP19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 C19orf43Q9BQ61 176 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 FICDQ9BVA6 458 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 PACSIN1Q9BY11 444 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 PLA2G3Q9NZ20 509 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 RSPH14Q9UHP6 348 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 ABCA2Q9BZC7 2435 aa19.39■□□□□ 0.69
PDLIM1-202ENST00000477757 ISM1B1AKI9 464 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 MAP2K7O14733 419 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 FDXRP22570 491 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 ACRV1P26436 265 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 ACADLP28330 430 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 CARSP49589 748 aaKnown RBP19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 ZBED6P86452 979 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 RBPJQ06330 500 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 CACNA1CQ13936 2221 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 GPR33Q49SQ1 333 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 OR5K2Q8NHB8 316 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 DNAJB8Q8NHS0 232 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 CCDC110Q8TBZ0 833 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 MTFMTQ96DP5 389 aaKnown RBP19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 BPIFA3Q9BQP9 254 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 GORASP1Q9BQQ3 440 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 NAT10Q9H0A0 1025 aaKnown RBP19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 PTGFRNQ9P2B2 879 aa19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 TDRKHQ9Y2W6 561 aaKnown RBP19.38■□□□□ 0.69
PDLIM1-202ENST00000477757 NAV3Q8IVL0 2385 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 TRBV5-4A0A0C4DH59 114 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 LIN7AO14910 233 aaPredicted RBP19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 SLC19A2O60779 497 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 CRTAMO95727 393 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 PRR35P0CG20 571 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 SMSP52788 366 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 CASP6P55212 293 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 TFDP2Q14188 446 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 GRM7Q14831 915 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 NR1I3Q14994 352 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 MFSD7Q6UXD7 560 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 CLDN19Q8N6F1 224 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 BRIX1Q8TDN6 353 aaKnown RBP19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 ZNF285Q96NJ3 590 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 QKIQ96PU8 341 aaKnown RBP eCLIP19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 GBA3Q9H227 469 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 IL1RAPL1Q9NZN1 696 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 TRHDEQ9UKU6 1024 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 KLHL20Q9Y2M5 609 aa19.37■□□□□ 0.69
PDLIM1-202ENST00000477757 ANKHD1Q8IWZ3 2542 aaKnown RBP19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 SPG11Q96JI7 2443 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 DIAPH2O60879 1101 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 RASAL1O95294 804 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 AP2A1O95782 977 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 MCM3P25205 808 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 ADRA1AP35348 466 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 CDKN2BP42772 138 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 KIR3DL1P43629 444 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 OR1D4P47884 311 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 CDKN1CP49918 316 aaPredicted RBP19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 GEMP55040 296 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 TYRO3Q06418 890 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 KLC1Q07866 573 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 TAZQ16635 292 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 ODF2Q5BJF6 829 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 TCTE1Q5JU00 501 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 RANBP10Q6VN20 620 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 SERPINA9Q86WD7 417 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 METTL27Q8N6F8 245 aaPredicted RBP19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 C8orf44Q96CB5 159 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 RNF32Q9H0A6 362 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 MCCC2Q9HCC0 563 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 DDX56Q9NY93 547 aaKnown RBP19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 PLAGL1Q9UM63 463 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 MRPS2Q9Y399 296 aaKnown RBP19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 CPAMD8Q8IZJ3 1885 aa19.36■□□□□ 0.69
PDLIM1-202ENST00000477757 A0A1W2PQ72 361 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 FITM1A5D6W6 292 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 CCL22O00626 93 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 KDM1AO60341 852 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 CST8O60676 142 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 ANXA9O76027 345 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 CLDN14O95500 239 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 SERPINA7P05543 415 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 COX6A1P12074 109 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 PKLRP30613 574 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 MC4RP32245 332 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 MSLNQ13421 630 aaPredicted RBP19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 CDSNQ15517 529 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 C3AR1Q16581 482 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 ATG9BQ674R7 924 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 CEP97Q8IW35 865 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 SIRT6Q8N6T7 355 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 TTC29Q8NA56 475 aaPredicted RBP19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 STT3BQ8TCJ2 826 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 CHTF18Q8WVB6 975 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 SPOCK3Q9BQ16 436 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 APOL2Q9BQE5 337 aa19.35■□□□□ 0.69
PDLIM1-202ENST00000477757 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms