RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 PRAMEF17Q5VTA0 474 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 NEPROQ6NW34 567 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 C16orf46Q6P387 395 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 FAM199XQ6PEV8 388 aaPredicted RBP8.01□□□□□ -1.13
HDAC6-221ENST00000477561 TAX1BP1Q86VP1 789 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 KMT5CQ86Y97 462 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 DENND6AQ8IWF6 608 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 FAM20CQ8IXL6 584 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 TBC1D21Q8IYX1 336 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 D2HGDHQ8N465 521 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 ESX1Q8N693 406 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 LPGAT1Q92604 370 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 KIAA1143Q96AT1 154 aaPredicted RBP8.01□□□□□ -1.13
HDAC6-221ENST00000477561 ZNF501Q96CX3 271 aaPredicted RBP8.01□□□□□ -1.13
HDAC6-221ENST00000477561 LRRC39Q96DD0 335 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 SIGLEC10Q96LC7 697 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 BIRC8Q96P09 236 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 IL17FQ96PD4 163 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 TRAPPC9Q96Q05 1148 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 PANX3Q96QZ0 392 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 ARHGAP9Q9BRR9 750 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 SLC12A9Q9BXP2 914 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 AKIRIN1Q9H9L7 192 aaPredicted RBP8.01□□□□□ -1.13
HDAC6-221ENST00000477561 SAYSD1Q9NPB0 183 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 FBXO6Q9NRD1 293 aaPredicted RBP8.01□□□□□ -1.13
HDAC6-221ENST00000477561 C1GALT1Q9NS00 363 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 POLG2Q9UHN1 485 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 NFS1Q9Y697 457 aa8.01□□□□□ -1.13
HDAC6-221ENST00000477561 PIKFYVEQ9Y2I7 2098 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 ZCWPW2A0A1B0GU75 182 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 ISM1B1AKI9 464 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 E7ESA3 106 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 MATN2O00339 956 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 PFDN6O15212 129 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 RIPK2O43353 540 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 KATNA1O75449 491 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 SCRG1O75711 98 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 C1QL1O75973 258 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 SASH3O75995 380 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 SLCO2B1O94956 709 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 TTC4O95801 387 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 S1PR4O95977 384 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 NUDT17P0C025 328 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 CCNYL3P0C7X3 344 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 PKMP14618 531 aaKnown RBP8□□□□□ -1.13
HDAC6-221ENST00000477561 UGT2B7P16662 529 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 TCN2P20062 427 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 OGNP20774 298 aaKnown RBP8□□□□□ -1.13
HDAC6-221ENST00000477561 PEBP1P30086 187 aaKnown RBP8□□□□□ -1.13
HDAC6-221ENST00000477561 SHMT2P34897 504 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 PHBP35232 272 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 STAT5AP42229 794 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 MAGEA3P43357 314 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 BDKRB1P46663 353 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 PDIA2Q13087 525 aaKnown RBP8□□□□□ -1.13
HDAC6-221ENST00000477561 GRB7Q14451 532 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 TYSND1Q2T9J0 566 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 DEFB110Q30KQ9 67 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 BBS9Q3SYG4 887 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 CCSMST1Q4G0I0 132 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 MSS51Q4VC12 460 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 HP1BP3Q5SSJ5 553 aaPredicted RBP8□□□□□ -1.13
HDAC6-221ENST00000477561 ATP1A1-AS1Q5TC04 95 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 ZNF470Q6ECI4 717 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 CYB5D1Q6P9G0 228 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 CNSTQ6PJW8 725 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 SPESP1Q6UW49 350 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 CDHR3Q6ZTQ4 885 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 OTOAQ7RTW8 1153 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 TMEM135Q86UB9 458 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 LRRC6Q86X45 466 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 CILP2Q8IUL8 1156 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 TMEM126BQ8IUX1 230 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 ZBED8Q8IZ13 594 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 IQCKQ8N0W5 287 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 EXD3Q8N9H8 876 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 SLC38A9Q8NBW4 561 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 OR1L3Q8NH93 324 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 GSDMBQ8TAX9 411 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 PYROXD1Q8WU10 500 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 SLC45A3Q96JT2 553 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 PWWP2AQ96N64 755 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 ZIM3Q96PE6 472 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 OR2A14Q96R47 310 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 TCF12Q99081 682 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 CCDC77Q9BR77 488 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 CDC42EP4Q9H3Q1 356 aaKnown RBP8□□□□□ -1.13
HDAC6-221ENST00000477561 FAM60AQ9NP50 221 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 MED4Q9NPJ6 270 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 C20orf96Q9NUD7 363 aaPredicted RBP8□□□□□ -1.13
HDAC6-221ENST00000477561 CROTQ9UKG9 612 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 PADI1Q9ULC6 663 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 PLAAQ9Y263 795 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 BTRCQ9Y297 605 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 KLHL20Q9Y2M5 609 aa8□□□□□ -1.13
HDAC6-221ENST00000477561 A0A087WUV0 522 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-221ENST00000477561 ZNF891A8MT65 544 aaPredicted RBP7.99□□□□□ -1.13
HDAC6-221ENST00000477561 TMEM150CB9EJG8 249 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 E5RI56 91 aa7.99□□□□□ -1.13
HDAC6-221ENST00000477561 TK2O00142 265 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms