RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ZNF415Q09FC8 603 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 KRTAP24-1Q3LI83 254 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 ITPRIPL2Q3MIP1 535 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 MFSD6Q6ZSS7 791 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 CCDC186Q7Z3E2 898 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 ZNF329Q86UD4 541 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 NUDT13Q86X67 352 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 THAP8Q8NA92 274 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 CAMKVQ8NCB2 501 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 OR11H4Q8NGC9 324 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 ROBO4Q8WZ75 1007 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 URM1Q9BTM9 101 aaKnown RBP4.51□□□□□ -1.69
PTCD3-211ENST00000476215 MIS12Q9H081 205 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 ST6GALNAC4Q9H4F1 302 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 SDR39U1Q9NRG7 319 aaPredicted RBP4.51□□□□□ -1.69
PTCD3-211ENST00000476215 SPHK1Q9NYA1 384 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 TMED3Q9Y3Q3 217 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 C2CD2Q9Y426 696 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 MROH2BQ7Z745 1585 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 KIAA1210Q9ULL0 1709 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 HMGXB3Q12766 1538 aa4.51□□□□□ -1.69
PTCD3-211ENST00000476215 CUX2O14529 1486 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 ANKRD61A6NGH8 418 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 CLDN4O14493 209 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 ATP6V0E1O15342 81 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 LINC01565O15544 149 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 FRMD6-AS1P0C7T7 363 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 HAPLN1P10915 354 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-211ENST00000476215 EFNA1P20827 205 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-211ENST00000476215 CCR10P46092 362 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 LHX1P48742 406 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 ASCL1P50553 236 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 B3GALT5-AS1P59052 145 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 POLR2LP62875 67 aaKnown RBP4.5□□□□□ -1.69
PTCD3-211ENST00000476215 CA9Q16790 459 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 UGP2Q16851 508 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 ODF4Q2M2E3 257 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 KIAA1644Q3SXP7 199 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 SPDYCQ5MJ68 293 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 SH2D5Q6ZV89 423 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 RTN4RL2Q86UN3 420 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 MAML2Q8IZL2 1156 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-211ENST00000476215 ZNF611Q8N823 705 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 MAPKAPK5-AS1Q8N8E1 139 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 KBTBD8Q8NFY9 601 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 FBXO17Q96EF6 278 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 OTUB1Q96FW1 271 aaPredicted RBP4.5□□□□□ -1.69
PTCD3-211ENST00000476215 MUS81Q96NY9 551 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 FEVQ99581 238 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 RAD9AQ99638 391 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 CPNE1Q99829 537 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 SLC25A23Q9BV35 468 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 FAM129AQ9BZQ8 928 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 SIX2Q9NPC8 291 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 KCNJ14Q9UNX9 436 aa4.5□□□□□ -1.69
PTCD3-211ENST00000476215 PEG3Q9GZU2 1588 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 PRR23AA6NEV1 266 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 ZNF197O14709 1029 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 NGFP01138 241 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 ERVK-10P10266 1014 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 CD22P20273 847 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 ITGA3P26006 1051 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 HOXC8P31273 242 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 HSPA4P34932 840 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 ZNF41P51814 821 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-211ENST00000476215 LIMK1P53667 647 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 TUBB4BP68371 445 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 CUL3Q13618 768 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 PSMD6Q15008 389 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 MCMDC2Q4G0Z9 681 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 TCTE1Q5JU00 501 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 SLFN11Q7Z7L1 901 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 EID3Q8N140 333 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 Q8NFD4 153 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 KIF18AQ8NI77 898 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 PHLDA1Q8WV24 401 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-211ENST00000476215 SPSB1Q96BD6 273 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 ZNF501Q96CX3 271 aaPredicted RBP4.49□□□□□ -1.69
PTCD3-211ENST00000476215 FER1L6-AS2Q96M78 137 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 FNBP1Q96RU3 617 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 FLRT3Q9NZU0 649 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 TBC1D7Q9P0N9 293 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 ANAPC5Q9UJX4 755 aa4.49□□□□□ -1.69
PTCD3-211ENST00000476215 STK36Q9NRP7 1315 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 AMBPP02760 352 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 CD48P09326 243 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 PLA2G4BP0C869 781 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 PRSS56P0CW18 603 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 FDPSP14324 419 aaKnown RBP4.48□□□□□ -1.69
PTCD3-211ENST00000476215 CDH3P22223 829 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 CHRNB4P30926 498 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 PTGER4P35408 488 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 KCNJ10P78508 379 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 GPR17Q13304 367 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 VEZF1Q14119 521 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 HYAL4Q2M3T9 481 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 UGT3A2Q3SY77 523 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 GFI1BQ5VTD9 330 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 ARHGEF16Q5VV41 709 aa4.48□□□□□ -1.69
PTCD3-211ENST00000476215 PPP1R21Q6ZMI0 780 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms