RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 A0A096LPK6 155 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 UBA6A0AVT1 1052 aaPredicted RBP15.22■□□□□ 0.03
CPSF3-203ENST00000475482 KLHL33A6NCF5 533 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 OR52A4PA6NMU1 304 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 PDZK1P1A8MUH7 402 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 FOXO6A8MYZ6 492 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 H3BMM5 538 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 CREB1P16220 341 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 GYS2P54840 703 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 RAB15P59190 212 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 SRSF6Q13247 344 aaKnown RBP15.22■□□□□ 0.03
CPSF3-203ENST00000475482 BCL7AQ4VC05 210 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 METRNLQ641Q3 311 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 CNSTQ6PJW8 725 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 FAM83HQ6ZRV2 1179 aaPredicted RBP15.22■□□□□ 0.03
CPSF3-203ENST00000475482 SH2D5Q6ZV89 423 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 PLXDC1Q8IUK5 500 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 HEXDCQ8WVB3 486 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 ASPSCR1Q9BZE9 553 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 RAB33BQ9H082 229 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 VPS11Q9H270 941 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 POPDC3Q9HBV1 291 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 FBXO8Q9NRD0 319 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 EPHA6Q9UF33 1036 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 ACOT9Q9Y305 439 aa15.22■□□□□ 0.03
CPSF3-203ENST00000475482 IGLV3-16A0A075B6K0 115 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 TRBV5-4A0A0C4DH59 114 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 OR2AG2A6NM03 316 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 STMND1H3BQB6 276 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 TOX3O15405 576 aaPredicted RBP15.21■□□□□ 0.03
CPSF3-203ENST00000475482 C1QL1O75973 258 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 UBXN7O94888 489 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 ESR1P03372 595 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 APOA4P06727 396 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 SAT1P21673 171 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 RPA3P35244 121 aaPredicted RBP15.21■□□□□ 0.03
CPSF3-203ENST00000475482 SLC26A3P40879 764 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 GPR18Q14330 331 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 ITIH4Q14624 930 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 TSNAXIP1Q2TAA8 658 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 CCDC153Q494R4 210 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 HECTD2Q5U5R9 776 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 UGT3A1Q6NUS8 523 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 TBC1D1Q86TI0 1168 aaPredicted RBP15.21■□□□□ 0.03
CPSF3-203ENST00000475482 TAX1BP1Q86VP1 789 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 TCP10LQ8TDR4 215 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 LPGAT1Q92604 370 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 NKD1Q969G9 470 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 SGF29Q96ES7 293 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 SIDT1Q9NXL6 827 aaKnown RBP15.21■□□□□ 0.03
CPSF3-203ENST00000475482 SLC39A1Q9NY26 324 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 TAS2R13Q9NYV9 303 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 SEMA5BQ9P283 1151 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 MID2Q9UJV3 735 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 CRYL1Q9Y2S2 319 aa15.21■□□□□ 0.03
CPSF3-203ENST00000475482 MGAT4DA6NG13 374 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 EFCAB7A8K855 629 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 A8MU76 341 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 PRMT5O14744 637 aaPredicted RBP15.2■□□□□ 0.02
CPSF3-203ENST00000475482 C2P06681 752 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 RALBP11234 206 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 MSH3P20585 1137 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 CD9P21926 228 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 RPS3P23396 243 aaKnown RBP eCLIP15.2■□□□□ 0.02
CPSF3-203ENST00000475482 ACRV1P26436 265 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 SKIV2L2P42285 1042 aaKnown RBP15.2■□□□□ 0.02
CPSF3-203ENST00000475482 GFERP55789 205 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 GNGT1P63211 74 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 NFE2L1Q14494 772 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 SEMA3AQ14563 771 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 ZKSCAN8Q15776 578 aaPredicted RBP15.2■□□□□ 0.02
CPSF3-203ENST00000475482 RPE65Q16518 533 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 LDB1Q86U70 411 aaPredicted RBP15.2■□□□□ 0.02
CPSF3-203ENST00000475482 SERPINA9Q86WD7 417 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 TRIM48Q8IWZ4 208 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 NXPE1Q8N323 547 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 BEND7Q8N7W2 519 aaPredicted RBP15.2■□□□□ 0.02
CPSF3-203ENST00000475482 OR2L2Q8NH16 312 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 MGARPQ8TDB4 240 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 TEFMQ96QE5 360 aaKnown RBP15.2■□□□□ 0.02
CPSF3-203ENST00000475482 AARSD1Q9BTE6 412 aaKnown RBP15.2■□□□□ 0.02
CPSF3-203ENST00000475482 SYTL2Q9HCH5 934 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 PSD3Q9NYI0 1048 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.2■□□□□ 0.02
CPSF3-203ENST00000475482 GNPTGQ9UJJ9 305 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 PLLPQ9Y342 182 aa15.2■□□□□ 0.02
CPSF3-203ENST00000475482 HELZ2Q9BYK8 2649 aaKnown RBP15.19■□□□□ 0.02
CPSF3-203ENST00000475482 CFAP99D6REC4 459 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 VPS26AO75436 327 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 PKMP14618 531 aaKnown RBP15.19■□□□□ 0.02
CPSF3-203ENST00000475482 WT1P19544 449 aaPredicted RBP15.19■□□□□ 0.02
CPSF3-203ENST00000475482 HALP42357 657 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 NSG1P42857 185 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 MAPK9P45984 424 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 CAPZBP47756 277 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 PRLHRP49683 370 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 TAS2R39P59534 338 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 GUCY1A3Q02108 690 aa15.19■□□□□ 0.02
CPSF3-203ENST00000475482 GABPB1Q06547 395 aaPredicted RBP15.19■□□□□ 0.02
CPSF3-203ENST00000475482 COL9A2Q14055 689 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms