RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 TMEM178AQ8NBL3 297 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 LNX1Q8TBB1 728 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 KBTBD7Q8WVZ9 684 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ATG4AQ8WYN0 398 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 FATE1Q969F0 183 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF578Q96N58 590 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 UHRF1Q96T88 793 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 C19orf43Q9BQ61 176 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 TBC1D17Q9HA65 648 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 NMUR1Q9HB89 426 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 BPIFA1Q9NP55 256 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 PRTFDC1Q9NRG1 225 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 PACSIN3Q9UKS6 424 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 TBX21Q9UL17 535 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 WASF3Q9UPY6 502 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 DUSP10Q9Y6W6 482 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 HTR3EA5X5Y0 456 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CDC7O00311 574 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 LSM1O15116 133 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SRPX2O60687 465 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 TSPAN9O75954 239 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 PIGNO95427 931 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 GJA1P17302 382 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 MAT2AP31153 395 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 KLK7P49862 253 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CLCNKAP51800 687 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 DIO3P55073 304 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 MTTPP55157 894 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CDH13P55290 713 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 RGS8P57771 180 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 DSC2Q02487 901 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 FAAP100Q0VG06 881 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 PRRT3Q5FWE3 981 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 KCTD11Q693B1 232 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 LAIR1Q6GTX8 287 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 C5orf46Q6UWT4 87 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ZYG11AQ6WRX3 759 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CCDC81Q6ZN84 652 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 MSANTD1Q6ZTZ1 278 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 GAREM2Q75VX8 874 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 FGD2Q7Z6J4 655 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 TMCO2Q7Z6W1 182 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 HPS6Q86YV9 775 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SLC41A1Q8IVJ1 513 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 KIAA2013Q8IYS2 634 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ARL10Q8N8L6 244 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ACVR1CQ8NER5 493 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 OR6Y1Q8NGX8 325 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 MIEF2Q96C03 454 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SNX15Q9NRS6 342 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 POLR3BQ9NW08 1133 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 HRASLS2Q9NWW9 162 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 P2RX2Q9UBL9 471 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SEC14L3Q9UDX4 400 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF490Q9ULM2 529 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ZFR2Q9UPR6 939 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 TEX13CA0A0J9YWL9 993 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 TPP1O14773 563 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 POLR1CO15160 346 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 PSIP1O75475 530 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CD2P06729 351 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 C1SP09871 688 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 EBLN1P0CF75 366 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF23P17027 643 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 EN2P19622 333 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 RPS3P23396 243 aaKnown RBP eCLIP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 FAUP35544 74 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SLC6A8P48029 635 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 RPL38P63173 70 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 IL10RAQ13651 578 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 DSC3Q14574 896 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ZNF630Q2M218 657 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SLC5A9Q2M3M2 681 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 LRRC23Q53EV4 343 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 KRT74Q7RTS7 529 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 IQCHQ86VS3 1027 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CREG2Q8IUH2 290 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ZC3H3Q8IXZ2 948 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CARFQ8N187 725 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CENPSQ8N2Z9 138 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 NXPE1Q8N323 547 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 RNASE11Q8TAA1 199 aaKnown RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 AP3S1Q92572 193 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 ROPN1LQ96C74 230 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 NXPE2Q96DL1 559 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 RNFT2Q96EX2 444 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 MYRFLQ96LU7 910 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SMOQ99835 787 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 FEM1AQ9BSK4 669 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CENPOQ9BU64 300 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 HDAC8Q9BY41 377 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 FAM117AQ9C073 453 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CCSER2Q9H7U1 834 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 L2HGDHQ9H9P8 463 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 SEMA4BQ9NPR2 832 aaPredicted RBP4.52□□□□□ -1.69
CCNL1-215ENST00000474539 TAS2R9Q9NYW1 312 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 KLRF1Q9NZS2 232 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 CHD4Q14839 1912 aa4.52□□□□□ -1.69
CCNL1-215ENST00000474539 STRCQ7RTU9 1775 aa4.51□□□□□ -1.69
CCNL1-215ENST00000474539 H0YC42 278 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms