RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 DLG1Q12959 904 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 FASTKQ14296 549 aaKnown RBP17.54■□□□□ 0.4
SNRPB-203ENST00000474384 C16orf72Q14CZ0 275 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 TSNQ15631 228 aaKnown RBP17.54■□□□□ 0.4
SNRPB-203ENST00000474384 CYP2A13Q16696 494 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 TAF1BQ53T94 588 aaPredicted RBP17.54■□□□□ 0.4
SNRPB-203ENST00000474384 CACHD1Q5VU97 1274 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 ANKS6Q68DC2 871 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 FBXO38Q6PIJ6 1188 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 SBSNQ6UWP8 590 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 MBOAT1Q6ZNC8 495 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 ARHGAP22Q7Z5H3 698 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 EPS8L3Q8TE67 593 aaKnown RBP17.54■□□□□ 0.4
SNRPB-203ENST00000474384 ZNF480Q8WV37 535 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 KCTD4Q8WVF5 259 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 ISL2Q96A47 359 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 GRAMD1AQ96CP6 724 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 HIST1H2AHQ96KK5 128 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 CCDC138Q96M89 665 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 PPM1MQ96MI6 270 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 MAP3K3Q99759 626 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 HIST1H2AJQ99878 128 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 H2AFJQ9BTM1 129 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 IGSF5Q9NSI5 407 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 UTP6Q9NYH9 597 aaKnown RBP17.54■□□□□ 0.4
SNRPB-203ENST00000474384 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.54■□□□□ 0.4
SNRPB-203ENST00000474384 POMT2Q9UKY4 750 aa17.54■□□□□ 0.4
SNRPB-203ENST00000474384 NOVA2Q9UNW9 492 aaKnown RBP17.54■□□□□ 0.4
SNRPB-203ENST00000474384 KNTC1P50748 2209 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 PABPN1LA6NDY0 278 aaKnown RBP17.53■□□□□ 0.4
SNRPB-203ENST00000474384 ERLIN1O75477 346 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 LTA4HP09960 611 aaKnown RBP17.53■□□□□ 0.4
SNRPB-203ENST00000474384 UGT2B7P16662 529 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 SLC26A3P40879 764 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 SEPHS1P49903 392 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 PNLIPRP1P54315 467 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 TRA2AQ13595 282 aaKnown RBP eCLIP17.53■□□□□ 0.4
SNRPB-203ENST00000474384 KIR2DS3Q14952 304 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 PPP1R3AQ16821 1122 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 CCDC91Q7Z6B0 441 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 CENPLQ8N0S6 344 aaPredicted RBP17.53■□□□□ 0.4
SNRPB-203ENST00000474384 PPFIBP2Q8ND30 876 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 FLVCR1-AS1Q8TAF5 88 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 HMGCLL1Q8TB92 370 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 PTERQ96BW5 349 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 NXNL1Q96CM4 212 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 MTBPQ96DY7 904 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 OR2A14Q96R47 310 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 TRIM54Q9BYV2 358 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 TWSG1Q9GZX9 223 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 PPCSQ9HAB8 311 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 ARL15Q9NXU5 204 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 NEUROG3Q9Y4Z2 214 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 AKAP13Q12802 2813 aa17.53■□□□□ 0.4
SNRPB-203ENST00000474384 ANKRD12Q6UB98 2062 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 IGHV5-51A0A0C4DH38 117 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 A0A1W2PNU3 283 aaPredicted RBP17.52■□□□□ 0.4
SNRPB-203ENST00000474384 TLDC2A0PJX2 215 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 TLCD2A6NGC4 264 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 CTIFO43310 598 aaKnown RBP17.52■□□□□ 0.4
SNRPB-203ENST00000474384 RFPL1O75677 317 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 GUCA1CO95843 209 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 MPOP05164 745 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 ENO2P09104 434 aaPredicted RBP17.52■□□□□ 0.4
SNRPB-203ENST00000474384 ERGP11308 486 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 CDH3P22223 829 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 IMPA1P29218 277 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 HSD17B2P37059 387 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 LSSP48449 732 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 IFFO1Q0D2I5 559 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 CAMK2BQ13554 666 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 ARHGAP19Q14CB8 494 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 OR4D1Q15615 310 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 SPESP1Q6UW49 350 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 SUSD1Q6UWL2 747 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 TIFABQ6ZNK6 161 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 PRSS42Q7Z5A4 293 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 ADAMTSL2Q86TH1 951 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 TRIM73Q86UV7 250 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 TDRPQ86YL5 185 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 SYTL1Q8IYJ3 562 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 LIN37Q96GY3 246 aaPredicted RBP17.52■□□□□ 0.4
SNRPB-203ENST00000474384 CD180Q99467 661 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 NMRAL1Q9HBL8 299 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 STOX2Q9P2F5 926 aaPredicted RBP17.52■□□□□ 0.4
SNRPB-203ENST00000474384 PLAAQ9Y263 795 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 OARD1Q9Y530 152 aa17.52■□□□□ 0.4
SNRPB-203ENST00000474384 KIF26BQ2KJY2 2108 aa17.51■□□□□ 0.39
SNRPB-203ENST00000474384 CCDC187A0A096LP49 1063 aa17.51■□□□□ 0.39
SNRPB-203ENST00000474384 PMS2P1A4D2B8 440 aa17.51■□□□□ 0.39
SNRPB-203ENST00000474384 CCDC151A5D8V7 595 aa17.51■□□□□ 0.39
SNRPB-203ENST00000474384 E7ENX8 843 aa17.51■□□□□ 0.39
SNRPB-203ENST00000474384 HGSO14964 777 aaPredicted RBP17.51■□□□□ 0.39
SNRPB-203ENST00000474384 TOX3O15405 576 aaPredicted RBP17.51■□□□□ 0.39
SNRPB-203ENST00000474384 PRICKLE3O43900 615 aaPredicted RBP17.51■□□□□ 0.39
SNRPB-203ENST00000474384 KLHL2O95198 593 aa17.51■□□□□ 0.39
SNRPB-203ENST00000474384 ANKRD34CP0C6C1 535 aa17.51■□□□□ 0.39
SNRPB-203ENST00000474384 HGFP14210 728 aa17.51■□□□□ 0.39
SNRPB-203ENST00000474384 TFEBP19484 476 aa17.51■□□□□ 0.39
SNRPB-203ENST00000474384 CSTF2P33240 577 aaKnown RBP eCLIP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms