RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 TBPL1P62380 186 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 PHEXP78562 749 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 OCRLQ01968 901 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 CDC16Q13042 620 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 HIST2H2ACQ16777 129 aaPredicted RBP9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 PTCHD3Q3KNS1 767 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 UNC50Q53HI1 259 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 FBXO48Q5FWF7 155 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 PRAMEF14Q5SWL7 426 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 PRAMEF13Q5VWM6 474 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 HIST2H2AA3Q6FI13 130 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 DUS1LQ6P1R4 473 aaKnown RBP9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 KLHL35Q6PF15 583 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 ABRAXAS1Q6UWZ7 409 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 ACAD11Q709F0 780 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 MILR1Q7Z6M3 343 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 CUZD1Q86UP6 607 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 THOC6Q86W42 341 aaKnown RBP9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 SPNS2Q8IVW8 549 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 MAML2Q8IZL2 1156 aaPredicted RBP9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 TBC1D19Q8N5T2 526 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 CCDC197Q8NCU1 140 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 ZNF548Q8NEK5 533 aaPredicted RBP9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 ZNF483Q8TF39 744 aaPredicted RBP9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 ZNF473Q8WTR7 871 aaKnown RBP9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 LCN9Q8WX39 176 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 SMPDL3AQ92484 453 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 SLC22A18Q96BI1 424 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 RILPQ96NA2 401 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 CAMK1GQ96NX5 476 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 ZNF317Q96PQ6 595 aaPredicted RBP9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 ELF4Q99607 663 aaPredicted RBP9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 C1QTNF3Q9BXJ4 246 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 SRMSQ9H3Y6 488 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 GSTO2Q9H4Y5 243 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 NOL11Q9H8H0 719 aaKnown RBP9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 IPPKQ9H8X2 491 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 ERVMER34-1Q9H9K5 563 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 EVA1BQ9NVM1 165 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 GULP1Q9UBP9 304 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 CIDEBQ9UHD4 219 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 PILRBQ9UKJ0 227 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 PCOLCE2Q9UKZ9 415 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 APOBEC2Q9Y235 224 aaKnown RBP9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 WDR37Q9Y2I8 494 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 KMT2EQ8IZD2 1858 aa9.98□□□□□ -0.81
PRPF38A-202ENST00000474048 ABCA7Q8IZY2 2146 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 COL6A3P12111 3177 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 TRBV23OR9-2A0A075B6M9 112 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 E2F3O00716 465 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 AZIN1O14977 448 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 ITM2AO43736 263 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 SDC3O75056 442 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 ENO1P06733 434 aaKnown RBP9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 CHRNGP07510 517 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 HGFP14210 728 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 TSPAN8P19075 237 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 GNAZP19086 355 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 DRD4P21917 467 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 MPSTP25325 297 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 IMPA1P29218 277 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 GGT5P36269 586 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 ARFIP2P53365 341 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 IRF8Q02556 426 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 HHEXQ03014 270 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 CLCA4Q14CN2 919 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 NAA25Q14CX7 972 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 LPAL2Q16609 132 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 CYP2A13Q16696 494 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 INAVAQ3KP66 663 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 PAGE2BQ5JRK9 111 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 C17orf64Q86WR6 236 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 OOSP2Q86WS3 158 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 SPATS2Q86XZ4 545 aaKnown RBP9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 DDIASQ8IXT1 998 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 CLYBLQ8N0X4 340 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 CHCHD4Q8N4Q1 142 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 ZNF781Q8N8C0 355 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 ZBTB44Q8NCP5 570 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 OR52E1Q8NGJ3 308 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 CCL4L1Q8NHW4 92 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 ZFPM2Q8WW38 1151 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 DLG3Q92796 817 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 ESAMQ96AP7 390 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 PYCR2Q96C36 320 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 REPS1Q96D71 796 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 THOC1Q96FV9 657 aaKnown RBP9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 LOXL4Q96JB6 756 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 ZNF382Q96SR6 550 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 TMEM79Q9BSE2 394 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 TCEAL2Q9H3H9 227 aaPredicted RBP9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 KIR3DX1Q9H7L2 352 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 GPRC5BQ9NZH0 403 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 CPNE7Q9UBL6 633 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 DCTN4Q9UJW0 460 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 GMEB2Q9UKD1 530 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 PLAGL1Q9UM63 463 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 SLC6A14Q9UN76 642 aa9.97□□□□□ -0.81
PRPF38A-202ENST00000474048 SNX6Q9UNH7 406 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms