RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 CHTF18Q8WVB6 975 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 TRIM63Q969Q1 353 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 EPYCQ99645 322 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 CD244Q9BZW8 370 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 NMUR1Q9HB89 426 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ABI2Q9NYB9 513 aaPredicted RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 SPATA7Q9P0W8 599 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ERVK-18Q9QC07 812 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 AGO1Q9UL18 857 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 NDRG4Q9ULP0 352 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 CFL2Q9Y281 166 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 PLXNA3P51805 1871 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 MYO16Q9Y6X6 1858 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 PTPRDP23468 1912 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 TRBV5-3A0A0A0MS03 114 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 SERTM1A2A2V5 107 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 OR2A25A4D2G3 310 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 TTC34A8MYJ7 566 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 MANBAO00462 879 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ENPP3O14638 875 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 RGS13O14921 159 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 INPPL1O15357 1258 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 OAZ2O95190 189 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 CLDN9O95484 217 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 C9P02748 559 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 MT-ND2P03891 347 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ANXA5P08758 320 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 AGXTP21549 392 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 PRDX3P30048 256 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 PIGAP37287 484 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 BRCC3P46736 316 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 TPTEP56180 551 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ITGA1P56199 1179 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 BNC1Q01954 994 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 TEAD4Q15561 434 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 KCNJ8Q15842 424 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 LDLRAD1Q5T700 205 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 NEK5Q6P3R8 708 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 EIF3MQ7L2H7 374 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 LRRC70Q7Z2Q7 622 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 RBM23Q86U06 439 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 LPCAT1Q8NF37 534 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ATL1Q8WXF7 558 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 RHBDF1Q96CC6 855 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 CMTM7Q96FZ5 175 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 CEP19Q96LK0 163 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 TRIM8Q9BZR9 551 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 SARS2Q9NP81 518 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 TMLHEQ9NVH6 421 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.98□□□□□ -1.45
HERC4-209ENST00000473533 KLQ9UEF7 1012 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 TMEFF2Q9UIK5 374 aaPredicted RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 ZNF225Q9UK10 706 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ZNF490Q9ULM2 529 aaPredicted RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 PCDHGB3Q9Y5G1 929 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 PDE4DIPQ5VU43 2346 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 MICAL3Q7RTP6 2002 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 CCL15-CCL14A0A0B4J2E2 113 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 A0A0U1RQF3 1178 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 MYO1GB0I1T2 1018 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 FAM47E-STBD1D6RA91 191 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 OR7A17O14581 309 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 RFXANKO14593 260 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ADAMDEC1O15204 470 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 XYLBO75191 536 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 NIPSNAP2O75323 286 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 FADS2O95864 444 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 RHOCP08134 193 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ANXA8P13928 327 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ITGA2P17301 1181 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 PRPS1L1P21108 318 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 SOX11P35716 441 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 IL1RL1Q01638 556 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 MAP2K5Q13163 448 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ABRAXAS2Q15018 415 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 CCL15Q16663 113 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 GPR33Q49SQ1 333 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 SPANXN4Q5MJ08 99 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 GLB1LQ6UWU2 654 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 METTL3Q86U44 580 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 MMAAQ8IVH4 418 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 FBXO22Q8NEZ5 403 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 OR52B6Q8NGF0 335 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 NDNFQ8TB73 568 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 USP7Q93009 1102 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 SPATA17Q96L03 361 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 COL21A1Q96P44 957 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 TBCDQ9BTW9 1192 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 SLIRPQ9GZT3 109 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 ACTL8Q9H568 366 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 SYNDIG1Q9H7V2 258 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 CCDC177Q9NQR7 707 aaPredicted RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 FAM120CQ9NX05 1096 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 RNF6Q9Y252 685 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 SLC27A5Q9Y2P5 690 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 SAMHD1Q9Y3Z3 626 aaKnown RBP5.98□□□□□ -1.45
HERC4-209ENST00000473533 PCDHB14Q9Y5E9 798 aa5.98□□□□□ -1.45
HERC4-209ENST00000473533 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.97□□□□□ -1.45
HERC4-209ENST00000473533 METTL15A6NJ78 407 aa5.97□□□□□ -1.45
HERC4-209ENST00000473533 ZBBXA8MT70 800 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms