RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 RASGRF2O14827 1237 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 KPNA5O15131 536 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 ZNF185O15231 689 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 NDUFS3O75489 264 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 S1PR4O95977 384 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 MAGP20916 626 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 ARNTP27540 789 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 RRADP55042 308 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 BASP1P80723 227 aaKnown RBP14.71□□□□□ -0.05
VTI1A-203ENST00000472892 CDK16Q00536 496 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 SRSF1Q07955 248 aaKnown RBP eCLIP14.71□□□□□ -0.05
VTI1A-203ENST00000472892 ATP1A4Q13733 1029 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 TMED2Q15363 201 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 NADK2Q4G0N4 442 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 C1orf189Q5VU69 101 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 PTRHD1Q6GMV3 140 aaKnown RBP14.71□□□□□ -0.05
VTI1A-203ENST00000472892 MRPL14Q6P1L8 145 aaKnown RBP14.71□□□□□ -0.05
VTI1A-203ENST00000472892 ATCAYQ86WG3 371 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 RAB43Q86YS6 212 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 HPS6Q86YV9 775 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 MCATQ8IVS2 390 aaKnown RBP14.71□□□□□ -0.05
VTI1A-203ENST00000472892 FAM20CQ8IXL6 584 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 LMNTD1Q8N9Z9 388 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 IP6K3Q96PC2 410 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 MRM3Q9HC36 420 aaKnown RBP14.71□□□□□ -0.05
VTI1A-203ENST00000472892 ENAMQ9NRM1 1142 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 HOMER3Q9NSC5 361 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 DHCR7Q9UBM7 475 aaKnown RBP14.71□□□□□ -0.05
VTI1A-203ENST00000472892 GPN3Q9UHW5 284 aaPredicted RBP14.71□□□□□ -0.05
VTI1A-203ENST00000472892 GNPTGQ9UJJ9 305 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 KLHL20Q9Y2M5 609 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 MED13Q9UHV7 2174 aa14.71□□□□□ -0.05
VTI1A-203ENST00000472892 TTLL8A6PVC2 850 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 PRICKLE3O43900 615 aaPredicted RBP14.7□□□□□ -0.06
VTI1A-203ENST00000472892 CEP104O60308 925 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 TPSB2P20231 275 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 MGAT1P26572 445 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 TPSAB1Q15661 275 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 FCRL6Q6DN72 434 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 LRRC8AQ8IWT6 810 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 C2orf73Q8N5S3 287 aaPredicted RBP14.7□□□□□ -0.06
VTI1A-203ENST00000472892 TRIM58Q8NG06 486 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 OR2Y1Q8NGV0 311 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 RAD51AP1Q96B01 352 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 PTERQ96BW5 349 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 MFSD3Q96ES6 412 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 BIRC8Q96P09 236 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 IL17FQ96PD4 163 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 SMAD5Q99717 465 aaKnown RBP14.7□□□□□ -0.06
VTI1A-203ENST00000472892 NDC1Q9BTX1 674 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 NUDT9Q9BW91 350 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 IFT80Q9P2H3 777 aaPredicted RBP14.7□□□□□ -0.06
VTI1A-203ENST00000472892 ANKMY1Q9P2S6 941 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 CIDEBQ9UHD4 219 aa14.7□□□□□ -0.06
VTI1A-203ENST00000472892 G3BP2Q9UN86 482 aaKnown RBP14.7□□□□□ -0.06
VTI1A-203ENST00000472892 PTRH2Q9Y3E5 179 aaKnown RBP14.7□□□□□ -0.06
VTI1A-203ENST00000472892 PCSK5Q92824 1860 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 TCRBV7S3A2A0A539 114 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 A6NL46 340 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 DPM1O60762 260 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 CNOT3O75175 753 aaKnown RBP14.69□□□□□ -0.06
VTI1A-203ENST00000472892 SORBS2O94875 1100 aaKnown RBP14.69□□□□□ -0.06
VTI1A-203ENST00000472892 VAPBO95292 243 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 FKBP9O95302 570 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 C1orf105O95561 183 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 ONECUT2O95948 504 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 OTX2P32243 289 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 FOLR3P41439 243 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 SF1Q15637 639 aaKnown RBP14.69□□□□□ -0.06
VTI1A-203ENST00000472892 NKAIN1Q4KMZ8 207 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 CTSL3PQ5NE16 218 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 MRNIPQ6NTE8 343 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 TTC23LQ6PF05 361 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 FIGLAQ6QHK4 219 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 CES3Q6UWW8 571 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 OTOAQ7RTW8 1153 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 MRGPREQ86SM8 312 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 SDCCAG8Q86SQ7 713 aaPredicted RBP14.69□□□□□ -0.06
VTI1A-203ENST00000472892 FAM26EQ8N5C1 309 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 PRELID2Q8N945 189 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 GSDMBQ8TAX9 411 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 CPT1CQ8TCG5 803 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 DENND1AQ8TEH3 1009 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 ZUFSPQ96AP4 578 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 TCF12Q99081 682 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 RAB11FIP5Q9BXF6 653 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 SLC22A11Q9NSA0 550 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 TXLNGQ9NUQ3 528 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 INTS7Q9NVH2 962 aaKnown RBP14.69□□□□□ -0.06
VTI1A-203ENST00000472892 IRAK4Q9NWZ3 460 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 SYBUQ9NX95 663 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 GPR83Q9NYM4 423 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.69□□□□□ -0.06
VTI1A-203ENST00000472892 NDOR1Q9UHB4 597 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 SLC39A10Q9ULF5 831 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 TTC7AQ9ULT0 858 aaPredicted RBP14.69□□□□□ -0.06
VTI1A-203ENST00000472892 SOX13Q9UN79 622 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 MAP4K5Q9Y4K4 846 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 MRFAP1Q9Y605 127 aa14.69□□□□□ -0.06
VTI1A-203ENST00000472892 TNRC6AQ8NDV7 1962 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms