RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 GSTA3Q16772 222 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 GGTA1PQ4G0N0 100 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 PRAMEF9Q5VWM5 478 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 ANO7Q6IWH7 933 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 GALNT13Q8IUC8 556 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 PHC3Q8NDX5 983 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 OR5AR1Q8NGP9 310 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 TFGQ92734 400 aaPredicted RBP17.62■□□□□ 0.41
SMC4-211ENST00000469858 UHRF1Q96T88 793 aaPredicted RBP17.62■□□□□ 0.41
SMC4-211ENST00000469858 NPAS2Q99743 824 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 LMAN1LQ9HAT1 526 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 ITM2CQ9NQX7 267 aa17.62■□□□□ 0.41
SMC4-211ENST00000469858 SDR39U1Q9NRG7 319 aaPredicted RBP17.62■□□□□ 0.41
SMC4-211ENST00000469858 CFAP20Q9Y6A4 193 aaKnown RBP17.62■□□□□ 0.41
SMC4-211ENST00000469858 KCNE1BA0A087WTH5 132 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 E7EQ34 232 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 H0Y8X5 98 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 CLGNO14967 610 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 SNRPB2P08579 225 aaKnown RBP17.61■□□□□ 0.41
SMC4-211ENST00000469858 DGKEP52429 567 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 TBPL1P62380 186 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 IRF8Q02556 426 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 SCUBE1Q8IWY4 988 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 PARP9Q8IXQ6 854 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 ULK2Q8IYT8 1036 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 L3MBTL4Q8NA19 623 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 KYQ8NBH2 561 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 MAGEC3Q8TD91 643 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 USP7Q93009 1102 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 OR4K3Q96R72 315 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 RMI1Q9H9A7 625 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 SGK2Q9HBY8 427 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 AIG1Q9NVV5 245 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 USP36Q9P275 1121 aaKnown RBP17.61■□□□□ 0.41
SMC4-211ENST00000469858 BAIAP2L1Q9UHR4 511 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 SUFUQ9UMX1 484 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 KCNK6Q9Y257 313 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 GPR45Q9Y5Y3 372 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 TRIOO75962 3097 aa17.61■□□□□ 0.41
SMC4-211ENST00000469858 KLHL33A6NCF5 533 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 SLC28A1O00337 649 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 IFRD1O00458 451 aaPredicted RBP17.6■□□□□ 0.41
SMC4-211ENST00000469858 FPGTO14772 594 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 RGS14O43566 566 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 SEMA4FO95754 770 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 SLC35G4P0C7Q5 338 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 ACADVLP49748 655 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 CLCNKAP51800 687 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 HMGCS1Q01581 520 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 IMPG1Q17R60 797 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 AP5B1Q2VPB7 878 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 MMEL1Q495T6 779 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 XKR6Q5GH73 641 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 FUNDC1Q8IVP5 155 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 KLHDC8AQ8IYD2 350 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 DEFB123Q8N688 67 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 LMNTD1Q8N9Z9 388 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 DENND6BQ8NEG7 585 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 SELENOMQ8WWX9 145 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 SLC45A3Q96JT2 553 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 ZMYND15Q9H091 742 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 ELOVL6Q9H5J4 265 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 EFCAB1Q9HAE3 211 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 C2orf42Q9NWW7 574 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 SNX6Q9UNH7 406 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 TDRKHQ9Y2W6 561 aaKnown RBP17.6■□□□□ 0.41
SMC4-211ENST00000469858 GPSM3Q9Y4H4 160 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 CCL27Q9Y4X3 112 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 C9JVG2 144 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 NR5A2O00482 541 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 SCAMP1O15126 338 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 ATP6V1G2O95670 118 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 PDYNP01213 254 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 HNRNPA2B1P22626 353 aaKnown RBP17.6■□□□□ 0.41
SMC4-211ENST00000469858 GNPDA1P46926 289 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 PRKCQQ04759 706 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 ART3Q13508 389 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 UBXN2BQ14CS0 331 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 PYCR3Q53H96 274 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 RNF165Q6ZSG1 346 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 SYT13Q7L8C5 426 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 TRIM46Q7Z4K8 759 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 DCUN1D3Q8IWE4 304 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 DSELQ8IZU8 1212 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 ZNF687Q8N1G0 1237 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 PPP3R2Q96LZ3 170 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 TIMM29Q9BSF4 260 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 SLC25A23Q9BV35 468 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 DENND2DQ9H6A0 471 aaPredicted RBP17.6■□□□□ 0.41
SMC4-211ENST00000469858 FGF22Q9HCT0 170 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 PLAGL1Q9UM63 463 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 CYP8B1Q9UNU6 501 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 PLEKHM1Q9Y4G2 1056 aa17.6■□□□□ 0.41
SMC4-211ENST00000469858 A0A088AWK7 358 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 KANSL1LA0AUZ9 987 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 NEK2P51955 445 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 RPL38P63173 70 aaKnown RBP17.59■□□□□ 0.41
SMC4-211ENST00000469858 DMPKQ09013 629 aa17.59■□□□□ 0.41
SMC4-211ENST00000469858 TBL3Q12788 808 aaKnown RBP17.59■□□□□ 0.41
SMC4-211ENST00000469858 STX5Q13190 355 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms