RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 SSPNQ14714 243 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 SLC6A19Q695T7 634 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 NLRP9Q7RTR0 991 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 CCDC89Q8N998 374 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 PPHLN1Q8NEY8 458 aaKnown RBP23.55■■□□□ 1.36
PTCH1-210ENST00000468211 PROKR1Q8TCW9 393 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 ASZ1Q8WWH4 475 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 PEX13Q92968 403 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 SMAD5Q99717 465 aaKnown RBP23.55■■□□□ 1.36
PTCH1-210ENST00000468211 CATSPERZQ9NTU4 200 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 EURLQ9NYK6 297 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 PAK5Q9P286 719 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 IFT80Q9P2H3 777 aaPredicted RBP23.55■■□□□ 1.36
PTCH1-210ENST00000468211 VPS4AQ9UN37 437 aa23.55■■□□□ 1.36
PTCH1-210ENST00000468211 DPM1O60762 260 aa23.54■■□□□ 1.36
PTCH1-210ENST00000468211 SLCO2B1O94956 709 aa23.54■■□□□ 1.36
PTCH1-210ENST00000468211 GP1BBP13224 206 aa23.54■■□□□ 1.36
PTCH1-210ENST00000468211 ITGAXP20702 1163 aa23.54■■□□□ 1.36
PTCH1-210ENST00000468211 CD9P21926 228 aa23.54■■□□□ 1.36
PTCH1-210ENST00000468211 FOLR3P41439 243 aa23.54■■□□□ 1.36
PTCH1-210ENST00000468211 SESN2P58004 480 aaPredicted RBP23.54■■□□□ 1.36
PTCH1-210ENST00000468211 INPP5JQ15735 1006 aaPredicted RBP23.54■■□□□ 1.36
PTCH1-210ENST00000468211 NKAIN1Q4KMZ8 207 aa23.54■■□□□ 1.36
PTCH1-210ENST00000468211 PCID2Q5JVF3 399 aa23.54■■□□□ 1.36
PTCH1-210ENST00000468211 MEI1Q5TIA1 1274 aa23.54■■□□□ 1.36
PTCH1-210ENST00000468211 MRPL14Q6P1L8 145 aaKnown RBP23.54■■□□□ 1.36
PTCH1-210ENST00000468211 TLDC1Q6P9B6 456 aa23.54■■□□□ 1.36
PTCH1-210ENST00000468211 OR2Y1Q8NGV0 311 aa23.54■■□□□ 1.36
PTCH1-210ENST00000468211 TREX1Q9NSU2 369 aa23.54■■□□□ 1.36
PTCH1-210ENST00000468211 IRAK4Q9NWZ3 460 aa23.54■■□□□ 1.36
PTCH1-210ENST00000468211 GPN3Q9UHW5 284 aaPredicted RBP23.54■■□□□ 1.36
PTCH1-210ENST00000468211 KRT87PA6NCN2 255 aa23.53■■□□□ 1.36
PTCH1-210ENST00000468211 PRMT5O14744 637 aaPredicted RBP23.53■■□□□ 1.36
PTCH1-210ENST00000468211 CD3EAPO15446 510 aaKnown RBP23.53■■□□□ 1.36
PTCH1-210ENST00000468211 APOA4P06727 396 aa23.53■■□□□ 1.36
PTCH1-210ENST00000468211 UMODP07911 640 aa23.53■■□□□ 1.36
PTCH1-210ENST00000468211 NMBRP28336 390 aa23.53■■□□□ 1.36
PTCH1-210ENST00000468211 RPS6KA1Q15418 735 aa23.53■■□□□ 1.36
PTCH1-210ENST00000468211 FCRL6Q6DN72 434 aa23.53■■□□□ 1.36
PTCH1-210ENST00000468211 PPP1R32Q7Z5V6 425 aa23.53■■□□□ 1.36
PTCH1-210ENST00000468211 MCATQ8IVS2 390 aaKnown RBP23.53■■□□□ 1.36
PTCH1-210ENST00000468211 DCUN1D3Q8IWE4 304 aa23.53■■□□□ 1.36
PTCH1-210ENST00000468211 C17orf62Q9BQA9 187 aa23.53■■□□□ 1.36
PTCH1-210ENST00000468211 NDC1Q9BTX1 674 aa23.53■■□□□ 1.36
PTCH1-210ENST00000468211 P2RY12Q9H244 342 aa23.53■■□□□ 1.36
PTCH1-210ENST00000468211 TXLNGQ9NUQ3 528 aa23.53■■□□□ 1.36
PTCH1-210ENST00000468211 NDOR1Q9UHB4 597 aa23.53■■□□□ 1.36
PTCH1-210ENST00000468211 SRPK3Q9UPE1 567 aa23.53■■□□□ 1.36
PTCH1-210ENST00000468211 HIVEP3Q5T1R4 2406 aa23.52■■□□□ 1.36
PTCH1-210ENST00000468211 MDC1Q14676 2089 aaKnown RBP23.52■■□□□ 1.36
PTCH1-210ENST00000468211 F8W8V4 182 aa23.52■■□□□ 1.36
PTCH1-210ENST00000468211 KDM1AO60341 852 aa23.52■■□□□ 1.36
PTCH1-210ENST00000468211 GRIA3P42263 894 aa23.52■■□□□ 1.36
PTCH1-210ENST00000468211 CCNG2Q16589 344 aa23.52■■□□□ 1.36
PTCH1-210ENST00000468211 CCSMST1Q4G0I0 132 aa23.52■■□□□ 1.36
PTCH1-210ENST00000468211 DCAF10Q5QP82 559 aa23.52■■□□□ 1.36
PTCH1-210ENST00000468211 UNC5DQ6UXZ4 953 aa23.52■■□□□ 1.36
PTCH1-210ENST00000468211 OR2L8Q8NGY9 312 aa23.52■■□□□ 1.36
PTCH1-210ENST00000468211 TSSK1BQ9BXA7 367 aa23.52■■□□□ 1.36
PTCH1-210ENST00000468211 TSGA10Q9BZW7 698 aa23.52■■□□□ 1.36
PTCH1-210ENST00000468211 P4HTMQ9NXG6 502 aa23.52■■□□□ 1.36
PTCH1-210ENST00000468211 ANAPC5Q9UJX4 755 aa23.52■■□□□ 1.36
PTCH1-210ENST00000468211 G3BP2Q9UN86 482 aaKnown RBP23.52■■□□□ 1.36
PTCH1-210ENST00000468211 RUVBL2Q9Y230 463 aaKnown RBP23.52■■□□□ 1.36
PTCH1-210ENST00000468211 NFS1Q9Y697 457 aa23.52■■□□□ 1.36
PTCH1-210ENST00000468211 KRT86O43790 486 aa23.51■■□□□ 1.35
PTCH1-210ENST00000468211 PRICKLE3O43900 615 aaPredicted RBP23.51■■□□□ 1.35
PTCH1-210ENST00000468211 MCM3P25205 808 aa23.51■■□□□ 1.35
PTCH1-210ENST00000468211 ARNTP27540 789 aa23.51■■□□□ 1.35
PTCH1-210ENST00000468211 PPARGP37231 505 aaPredicted RBP23.51■■□□□ 1.35
PTCH1-210ENST00000468211 TTPAP49638 278 aa23.51■■□□□ 1.35
PTCH1-210ENST00000468211 AARS2Q5JTZ9 985 aaKnown RBP23.51■■□□□ 1.35
PTCH1-210ENST00000468211 PNPLA2Q96AD5 504 aa23.51■■□□□ 1.35
PTCH1-210ENST00000468211 IP6K3Q96PC2 410 aa23.51■■□□□ 1.35
PTCH1-210ENST00000468211 EIF2B3Q9NR50 452 aaKnown RBP23.51■■□□□ 1.35
PTCH1-210ENST00000468211 RASGRF2O14827 1237 aa23.5■■□□□ 1.35
PTCH1-210ENST00000468211 S1PR4O95977 384 aa23.5■■□□□ 1.35
PTCH1-210ENST00000468211 RPN2P04844 631 aa23.5■■□□□ 1.35
PTCH1-210ENST00000468211 ALAS2P22557 587 aa23.5■■□□□ 1.35
PTCH1-210ENST00000468211 BDKRB1P46663 353 aa23.5■■□□□ 1.35
PTCH1-210ENST00000468211 KCNJ1P48048 391 aa23.5■■□□□ 1.35
PTCH1-210ENST00000468211 PLEKHN1Q494U1 663 aaPredicted RBP23.5■■□□□ 1.35
PTCH1-210ENST00000468211 PTRHD1Q6GMV3 140 aaKnown RBP23.5■■□□□ 1.35
PTCH1-210ENST00000468211 FIGLAQ6QHK4 219 aa23.5■■□□□ 1.35
PTCH1-210ENST00000468211 CES3Q6UWW8 571 aa23.5■■□□□ 1.35
PTCH1-210ENST00000468211 TTLL10Q6ZVT0 673 aa23.5■■□□□ 1.35
PTCH1-210ENST00000468211 ZDHHC19Q8WVZ1 309 aaPredicted RBP23.5■■□□□ 1.35
PTCH1-210ENST00000468211 PTERQ96BW5 349 aa23.5■■□□□ 1.35
PTCH1-210ENST00000468211 SLAMF7Q9NQ25 335 aa23.5■■□□□ 1.35
PTCH1-210ENST00000468211 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.5■■□□□ 1.35
PTCH1-210ENST00000468211 DRG1Q9Y295 367 aaKnown RBP23.5■■□□□ 1.35
PTCH1-210ENST00000468211 TCP11X1B4DZS4 312 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 SEMA7AO75326 666 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 RNF224P0DH78 156 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 PSMB5P28074 263 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 BASP1P80723 227 aaKnown RBP23.49■■□□□ 1.35
PTCH1-210ENST00000468211 MRPL49Q13405 166 aaKnown RBP23.49■■□□□ 1.35
PTCH1-210ENST00000468211 TMED2Q15363 201 aa23.49■■□□□ 1.35
PTCH1-210ENST00000468211 SF1Q15637 639 aaKnown RBP23.49■■□□□ 1.35
PTCH1-210ENST00000468211 CTSL3PQ5NE16 218 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms