RNA–Protein interactions for RNA: ENST00000468136.5

MSH5-213, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-213ENST00000468136 CXCR2P25025 360 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 ACADLP28330 430 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 POLR2JP52435 117 aaKnown RBP9.91□□□□□ -0.82
MSH5-213ENST00000468136 METAP1P53582 386 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 KIAA1024LP59773 190 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 PFN3P60673 137 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 SLC34A1Q06495 639 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 LRRC74AQ0VAA2 488 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 BNIP2Q12982 314 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 GRB7Q14451 532 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 HABP4Q5JVS0 413 aaKnown RBP9.91□□□□□ -0.82
MSH5-213ENST00000468136 METRNLQ641Q3 311 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 NAIF1Q69YI7 327 aaPredicted RBP9.91□□□□□ -0.82
MSH5-213ENST00000468136 C8orf82Q6P1X6 216 aaPredicted RBP9.91□□□□□ -0.82
MSH5-213ENST00000468136 PAOXQ6QHF9 649 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 GK5Q6ZS86 529 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 THOC6Q86W42 341 aaKnown RBP9.91□□□□□ -0.82
MSH5-213ENST00000468136 TRIM69Q86WT6 500 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 FUNDC1Q8IVP5 155 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 SFTPA1Q8IWL2 248 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.91□□□□□ -0.82
MSH5-213ENST00000468136 SFRP1Q8N474 314 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 SLC44A3Q8N4M1 653 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 TP53I13Q8NBR0 393 aaPredicted RBP9.91□□□□□ -0.82
MSH5-213ENST00000468136 PPFIBP2Q8ND30 876 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 FBXO27Q8NI29 283 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 ASB9Q96DX5 294 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 SCARF2Q96GP6 870 aaPredicted RBP9.91□□□□□ -0.82
MSH5-213ENST00000468136 SH3GL1Q99961 368 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 SGPP1Q9BX95 441 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 OSBPL6Q9BZF3 934 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 OR52A5Q9H2C5 316 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 KCNK12Q9HB15 430 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 FBRSL1Q9HCM7 1045 aaKnown RBP9.91□□□□□ -0.82
MSH5-213ENST00000468136 POMPQ9Y244 141 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 SLC22A14Q9Y267 594 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 SLC17A4Q9Y2C5 497 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 RNF11Q9Y3C5 154 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 CCL27Q9Y4X3 112 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 HEBP2Q9Y5Z4 205 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 CEP290O15078 2479 aa9.91□□□□□ -0.82
MSH5-213ENST00000468136 A0A1B0GTL3 188 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 A0A1W2PQF6 199 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 A0A1W2PQU0 124 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 KANSL1LA0AUZ9 987 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 K7ESM1 405 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 NR5A2O00482 541 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 MBTPS2O43462 519 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 RNGTTO60942 597 aaKnown RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 ENTPD5O75356 428 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 BCAS2O75934 225 aaPredicted RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 EGFP01133 1207 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 SLC2A4P14672 509 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 DDX5P17844 614 aaKnown RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 NDUFS1P28331 727 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 IMPA1P29218 277 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 HALP42357 657 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 GDF5P43026 501 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 SOX9P48436 509 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 CLCNKAP51800 687 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 ADPRHP54922 357 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 SEC13P55735 322 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 CHIT1Q13231 466 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 NAE1Q13564 534 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 TRIM25Q14258 630 aaKnown RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 ABRAXAS2Q15018 415 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 PON2Q15165 354 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 IRF4Q15306 451 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 ZNF423Q2M1K9 1284 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 C18orf21Q32NC0 220 aaPredicted RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 C2orf27AQ580R0 203 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 FBXO48Q5FWF7 155 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 IL23RQ5VWK5 629 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 CYP20A1Q6UW02 462 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 LCTLQ6UWM7 567 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 C11orf96Q7Z7L8 435 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 ZNF547Q8IVP9 402 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 TBC1D21Q8IYX1 336 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 OR2T34Q8NGX1 318 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 OR2T11Q8NH01 316 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 OR14C36Q8NHC7 312 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 HMGCLL1Q8TB92 370 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 MARK4Q96L34 752 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 FCRL1Q96LA6 429 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 CDK15Q96Q40 435 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 UHRF1Q96T88 793 aaPredicted RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 PKP4Q99569 1192 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 GPATCH1Q9BRR8 931 aaKnown RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 TACO1Q9BSH4 297 aaKnown RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 DPY30Q9C005 99 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 TRIT1Q9H3H1 467 aaKnown RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 EBF2Q9HAK2 575 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 POLMQ9NP87 494 aaPredicted RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 SIRT5Q9NXA8 310 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 TMEM181Q9P2C4 612 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 ABCD2Q9UBJ2 740 aa9.9□□□□□ -0.82
MSH5-213ENST00000468136 MBD1Q9UIS9 605 aaPredicted RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 TSR3Q9UJK0 312 aaKnown RBP9.9□□□□□ -0.82
MSH5-213ENST00000468136 MMP17Q9ULZ9 603 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms