RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 E5RI56 91 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 H3BMM5 538 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 MAP3K7O43318 606 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 CPNE3O75131 537 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 SEC31AO94979 1220 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 ERVK-10P10266 1014 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 FOLR1P15328 257 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 PTPN4P29074 926 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 PRDX3P30048 256 aaKnown RBP13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 ELK3P41970 407 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 KCNAB1Q14722 419 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 COLEC12Q5KU26 742 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 SPANXN3Q5MJ09 141 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 PLEKHS1Q5SXH7 462 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 PWWP2BQ6NUJ5 590 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 HIBCHQ6NVY1 386 aaPredicted RBP13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 MAATS1Q7Z4T9 603 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 SYVN1Q86TM6 617 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 IGDCC3Q8IVU1 814 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 ADGRF3Q8IZF5 1079 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 TEX19Q8NA77 164 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 CFAP36Q96G28 342 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 C16orf45Q96MC5 204 aaPredicted RBP13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 CCDC68Q9H2F9 335 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 C1GALT1Q9NS00 363 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 FGF21Q9NSA1 209 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 SOHLH2Q9NX45 425 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 GALPQ9UBC7 116 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 CIDEBQ9UHD4 219 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 FBXO5Q9UKT4 447 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 ICKQ9UPZ9 632 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 BTRCQ9Y297 605 aa13.6□□□□□ -0.23
CCHCR1-211ENST00000467553 NAV2Q8IVL1 2488 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 C2orf74A8MZ97 194 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 SMAPO00193 183 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 KDM1AO60341 852 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 HAUS5O94927 633 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 TTC4O95801 387 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 RPN2P04844 631 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 KLK3P07288 261 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 EBLN1P0CF75 366 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 TPBGLP0DKB5 382 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 SHMT2P34897 504 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 SLC1A2P43004 574 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 RPL21P46778 160 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 ADARP55265 1226 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 ARL4CP56559 192 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 UBAP2LQ14157 1087 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 CRYMQ14894 314 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 HIF1AQ16665 826 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 UGT8Q16880 541 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 TTC23LQ6PF05 361 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 CNSTQ6PJW8 725 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 ZNF517Q6ZMY9 492 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 KCNMB4Q86W47 210 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 ANKMY2Q8IV38 441 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 LMNTD2Q8IXW0 634 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 C2orf73Q8N5S3 287 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 CT55Q8WUE5 264 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 ZNF592Q92610 1267 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 NAT9Q9BTE0 207 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 DPH5Q9H2P9 285 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 PPANQ9NQ55 473 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 ACTR10Q9NZ32 417 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 POMT2Q9UKY4 750 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 CHMP2BQ9UQN3 213 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 FARSAQ9Y285 508 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 MAN2B2Q9Y2E5 1009 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 PCDHGB7Q9Y5F8 929 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 NFS1Q9Y697 457 aa13.59□□□□□ -0.23
CCHCR1-211ENST00000467553 CDC14CA4D256 554 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 FAM187AA6NFU0 413 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 ISM1B1AKI9 464 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 RAD51CO43502 376 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 URI1O94763 535 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 RAB40ALP0C0E4 278 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 CD97P48960 835 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 CARSP49589 748 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 MPP1Q00013 466 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 PDIA2Q13087 525 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 ACSBG2Q5FVE4 666 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 ATP1A1-AS1Q5TC04 95 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 UNC5DQ6UXZ4 953 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 ASB18Q6ZVZ8 466 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 ATCAYQ86WG3 371 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 HPS6Q86YV9 775 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 ZBTB2Q8N680 514 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 LMNTD1Q8N9Z9 388 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 GABPB2Q8TAK5 448 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 ZNF501Q96CX3 271 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 FOPNLQ96NB1 174 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 ERP44Q9BS26 406 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 FAM167BQ9BTA0 163 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 KLHL25Q9H0H3 589 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 ACTL8Q9H568 366 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 SPHK1Q9NYA1 384 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 ZC3H7BQ9UGR2 993 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 SLC39A10Q9ULF5 831 aa13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 RUVBL2Q9Y230 463 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-211ENST00000467553 TP53TG5Q9Y2B4 290 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms