RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 ORC3Q9UBD5 711 aaPredicted RBP2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 CACNG4Q9UBN1 327 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 LAS1LQ9Y4W2 734 aaKnown RBP2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 NME7Q9Y5B8 376 aa2.35□□□□□ -2.03
GTF3C3-209ENST00000466862 CCDC189A1A4V9 331 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 ACOD1A6NK06 481 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 MYO1GB0I1T2 1018 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 XRCC3O43542 346 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 TOMM70O94826 608 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 DDHD2O94830 711 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 IGKV3-15P01624 115 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 CD4P01730 458 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 HSPA8P11142 646 aaKnown RBP2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 PRKACGP22612 351 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 PAX3P23760 479 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 SIRPAP78324 504 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 GCNT1Q02742 428 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 IRF3Q14653 427 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 HERC3Q15034 1050 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 ELFN2Q5R3F8 820 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 TMED8Q6PL24 325 aaPredicted RBP2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 LDB1Q86U70 411 aaPredicted RBP2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 ADIPOR2Q86V24 386 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 CEP57Q86XR8 500 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 ADGRF2Q8IZF7 708 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 SCFD2Q8WU76 684 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 USP6NLQ92738 828 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 C1orf147Q96MC9 270 aaPredicted RBP2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 RAD9AQ99638 391 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 RPP25Q9BUL9 199 aaKnown RBP2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 SLC26A6Q9BXS9 759 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 HRH4Q9H3N8 390 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 UNC45AQ9H3U1 944 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 KCNK15Q9H427 330 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 MED20Q9H944 212 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 OR6C2Q9NZP2 312 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 B3GAT1Q9P2W7 334 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 SEC63Q9UGP8 760 aaKnown RBP2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 ZNF148Q9UQR1 794 aa2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 WBP11Q9Y2W2 641 aaKnown RBP2.34□□□□□ -2.03
GTF3C3-209ENST00000466862 SH3BP5O60239 455 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 USO1O60763 962 aaKnown RBP2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 CDK2AP2O75956 126 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 HOXD4P09016 255 aaPredicted RBP2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 CLTBP09497 229 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 MAN1A1P33908 653 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 ETV5P41161 510 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 PNLIPRP2P54317 469 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 TPD52P55327 224 aaPredicted RBP2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 MAT1AQ00266 395 aaKnown RBP2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 ZNF415Q09FC8 603 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 LMOD3Q0VAK6 560 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 TAF10Q12962 218 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 G3BP1Q13283 466 aaKnown RBP eCLIP2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 CRYMQ14894 314 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 RNF212Q495C1 297 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 SEL1L3Q68CR1 1132 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 TEX38Q6PEX7 206 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 FRRS1Q6ZNA5 592 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 TBC1D1Q86TI0 1168 aaPredicted RBP2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 CFAP206Q8IYR0 622 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 ZPLD1Q8TCW7 415 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 APOBEC4Q8WW27 367 aaKnown RBP2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 DHX58Q96C10 678 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 EVI5LQ96CN4 794 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 NEK1Q96PY6 1258 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 OVOL2Q9BRP0 275 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 FNDC11Q9BVV2 318 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 UBA5Q9GZZ9 404 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 SPATC1LQ9H0A9 340 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 CHMP1AQ9HD42 196 aaPredicted RBP2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 Q9N2K0 584 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 CTSZQ9UBR2 303 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 HACL1Q9UJ83 578 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 PLAGL1Q9UM63 463 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 STUB1Q9UNE7 303 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 ZNF510Q9Y2H8 683 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 TRIM17Q9Y577 477 aa2.33□□□□□ -2.04
GTF3C3-209ENST00000466862 A0A087X0M5 115 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 A0A1B0GX30 115 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 ANKUB1A6NFN9 424 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 ANKRD61A6NGH8 418 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 F5H0A9 414 aaPredicted RBP2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 RTL8CO15255 209 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 NPHP1O15259 732 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 AVILO75366 819 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 VPREB1P12018 145 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 PRG2P13727 222 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 CDC25CP30307 473 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 ARL3P36405 182 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 HADHAP40939 763 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 TMF1P82094 1093 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 EFTUD2Q15029 972 aaKnown RBP eCLIP2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 RALBP1Q15311 655 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 C15orf32Q32M92 178 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 LEKR1Q6ZMV7 388 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 COMMD2Q86X83 199 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 MARCH9Q86YJ5 346 aa2.32□□□□□ -2.04
GTF3C3-209ENST00000466862 EID3Q8N140 333 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms