RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 WDFY4Q6ZS81 3184 aa3.94□□□□□ -1.78
EDEM3-205ENST00000466606 CCDC88AQ3V6T2 1871 aa3.94□□□□□ -1.78
EDEM3-205ENST00000466606 DLEC1Q9Y238 1755 aa3.94□□□□□ -1.78
EDEM3-205ENST00000466606 TPRP12270 2363 aaKnown RBP3.94□□□□□ -1.78
EDEM3-205ENST00000466606 GCN1Q92616 2671 aaKnown RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 A0A0B4J293 547 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 A0A1W2PQ09 198 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 ANKRD18BA2A2Z9 1011 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 OR2M5A3KFT3 312 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 CTAGE5O15320 804 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 STX6O43752 255 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 SLC22A3O75751 556 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 RSL1D1O76021 490 aaKnown RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 GFPT2O94808 682 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 BMP10O95393 424 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 SELLP14151 372 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 MYL6BP14649 208 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 MMP9P14780 707 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 GM2AP17900 193 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 CASTP20810 708 aaKnown RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 NMBRP28336 390 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 GCH1P30793 250 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 AHRP35869 848 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 MMP14P50281 582 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 HUNKP57058 714 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 PSMC6P62333 389 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 PHEXP78562 749 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 MBTD1Q05BQ5 628 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 TRDNQ13061 729 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 KCNC3Q14003 757 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 NECTIN1Q15223 517 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 MAPRE1Q15691 268 aaKnown RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 IMMTQ16891 758 aaKnown RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 ACCSLQ4AC99 568 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 CCDC152Q4G0S7 254 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 DUSP28Q4G0W2 176 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 RAB41Q5JT25 222 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 C9orf50Q5SZB4 431 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 HYIQ5T013 277 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 CCDC183Q5T5S1 534 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 NAA16Q6N069 864 aaPredicted RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 C19orf48Q6RUI8 117 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 CWC27Q6UX04 472 aaKnown RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 PLEKHM3Q6ZWE6 761 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 ZNF534Q76KX8 674 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 MARK2Q7KZI7 788 aaKnown RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 NFE4Q86UQ8 179 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 ARID3BQ8IVW6 561 aaPredicted RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 DCUN1D3Q8IWE4 304 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 CCDC34Q96HJ3 373 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 JAKMIP1Q96N16 626 aaKnown RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 TREX2Q9BQ50 279 aaPredicted RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 MAK16Q9BXY0 300 aaKnown RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 NYXQ9GZU5 481 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 HRH4Q9H3N8 390 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 RNF41Q9H4P4 317 aaPredicted RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 GRPEL1Q9HAV7 217 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 DDX19AQ9NUU7 478 aaKnown RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 VPS28Q9UK41 221 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 CFAP45Q9UL16 551 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 TMEM184BQ9Y519 407 aaPredicted RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 AKAP11Q9UKA4 1901 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 ZFHX2Q9C0A1 2572 aaPredicted RBP3.93□□□□□ -1.78
EDEM3-205ENST00000466606 STK36Q9NRP7 1315 aa3.93□□□□□ -1.78
EDEM3-205ENST00000466606 DDX60LQ5H9U9 1706 aaKnown RBP3.92□□□□□ -1.78
EDEM3-205ENST00000466606 A0A1B0GUL7 405 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 hCG_1807616A0A1W2PRN6 198 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 B4DLN1 442 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 SYNGR3O43761 229 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 CTSVO60911 334 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 TMCC2O75069 709 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 IGHV4-39P01824 125 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 TFAP2AP05549 437 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 LIPFP07098 398 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 HOXA13P31271 388 aaPredicted RBP3.92□□□□□ -1.78
EDEM3-205ENST00000466606 PSMB10P40306 273 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 MRPL12P52815 198 aaKnown RBP3.92□□□□□ -1.78
EDEM3-205ENST00000466606 CTSCP53634 463 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 TERF1P54274 439 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 EIF5P55010 431 aaKnown RBP3.92□□□□□ -1.78
EDEM3-205ENST00000466606 EVCP57679 992 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 SNX16P57768 344 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 AIMP1Q12904 312 aaKnown RBP3.92□□□□□ -1.78
EDEM3-205ENST00000466606 ACVR2BQ13705 512 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 MEA1Q16626 185 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 LRIT3Q3SXY7 679 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 RAB6CQ53S08 254 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 ZDHHC20Q5W0Z9 365 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 ALS2CLQ60I27 953 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 TPRG1Q6ZUI0 275 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 TRMT1LQ7Z2T5 733 aaKnown RBP3.92□□□□□ -1.78
EDEM3-205ENST00000466606 C1orf131Q8NDD1 294 aaKnown RBP3.92□□□□□ -1.78
EDEM3-205ENST00000466606 SEMA4DQ92854 862 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 MOAP1Q96BY2 351 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 ST6GAL2Q96JF0 529 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 ZNF354BQ96LW1 612 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 UHRF2Q96PU4 802 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 NACAP1Q9BZK3 213 aa3.92□□□□□ -1.78
EDEM3-205ENST00000466606 UBA5Q9GZZ9 404 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms