RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 VPS18Q9P253 973 aa4.07□□□□□ -1.76
CDC42BPA-211ENST00000466538 ZDHHC2Q9UIJ5 367 aa4.07□□□□□ -1.76
CDC42BPA-211ENST00000466538 CDH7Q9ULB5 785 aa4.07□□□□□ -1.76
CDC42BPA-211ENST00000466538 TRIP12Q14669 1992 aaPredicted RBP4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 IGKV2D-30A0A075B6S6 120 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 TRAV24A0A0B4J272 114 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 A0A1B0GUV1 79 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 OOEPA6NGQ2 149 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 C5orf52A6NGY3 159 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 SMTNL1A8MU46 457 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 KCNAB3O43448 404 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 PRKNO60260 465 aaPredicted RBP4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 KRT36O76013 467 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 TGDSO95455 350 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 HAPLN1P10915 354 aaPredicted RBP4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 VDRP11473 427 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 TCF4P15884 667 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 TKTP29401 623 aaKnown RBP4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 SOAT1P35610 550 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 CRKLP46109 303 aaKnown RBP4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 MFAP3P55082 362 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 UBASH3AP57075 661 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 KLC1Q07866 573 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 LGALS3BPQ08380 585 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 NPTX1Q15818 432 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 MEP1BQ16820 701 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 UGT3A2Q3SY77 523 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 CORO6Q6QEF8 472 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 LINC00696Q6ZRV3 163 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 SLC9B2Q86UD5 537 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 NDUFAF2Q8N183 169 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 RFLNBQ8N5W9 214 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 BMPERQ8N8U9 685 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 DMBX1Q8NFW5 382 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 OR13A1Q8NGR1 328 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 OR1J1Q8NGS3 322 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 DNASE1L2Q92874 299 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 STAMBPL1Q96FJ0 436 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 THOC1Q96FV9 657 aaKnown RBP4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 ST6GAL2Q96JF0 529 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 INTS14Q96SY0 518 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 PARK7Q99497 189 aaKnown RBP4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 DESI2Q9BSY9 194 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 TRAF4Q9BUZ4 470 aaPredicted RBP4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 MTMR12Q9C0I1 747 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 DNAJC4Q9NNZ3 241 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 GSN-AS1Q9NRJ2 163 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 ECHDC1Q9NTX5 307 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 ERAP1Q9NZ08 941 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 LIPT1Q9Y234 373 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 JRKLQ9Y4A0 524 aa4.06□□□□□ -1.76
CDC42BPA-211ENST00000466538 A0A1W2PPK0 400 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 PLOD2O00469 737 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 ACSL3O95573 720 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 ATP1A1P05023 1023 aaKnown RBP4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 SPP1P10451 314 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 TGFB3P10600 412 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 MNDAP41218 407 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 RPL21P46778 160 aaKnown RBP4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 RGS7P49802 495 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 CLDN15P56746 228 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 HERV-K104P61576 105 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 YWHAHQ04917 246 aaPredicted RBP4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 TNK1Q13470 666 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 E2F5Q15329 346 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 ODF4Q2M2E3 257 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 TYSND1Q2T9J0 566 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 ITPRIPL2Q3MIP1 535 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 ODF2Q5BJF6 829 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 NHSL2Q5HYW2 709 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 LRRC73Q5JTD7 316 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 C15orf39Q6ZRI6 1047 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 C9orf139Q6ZV77 190 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 IQCA1Q86XH1 822 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 TMEM139Q8IV31 216 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 RASGEF1AQ8N9B8 481 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 ATAD1Q8NBU5 361 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 VANGL1Q8TAA9 524 aaPredicted RBP4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 GRHL3Q8TE85 626 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 SPATA33Q96N06 139 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 ZNF583Q96ND8 569 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 TRMT61BQ9BVS5 477 aaKnown RBP4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 DNAI2Q9GZS0 605 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 RETREG1Q9H6L5 497 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 PELI2Q9HAT8 420 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 PTTG2Q9NZH5 202 aa4.05□□□□□ -1.76
CDC42BPA-211ENST00000466538 A0A1W2PPW3 197 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 ANKRD61A6NGH8 418 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 CASTOR2A6NHX0 329 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 XPNPEP2O43895 674 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 RPS6KA5O75582 802 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 ATP6AP2O75787 350 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 PGLSO95336 258 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 C9P02748 559 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 F7P08709 466 aaPredicted RBP4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 PAX1P15863 534 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 AMD1P17707 334 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 EFNA1P20827 205 aaPredicted RBP4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 CA6P23280 308 aa4.04□□□□□ -1.76
CDC42BPA-211ENST00000466538 AZGP1P25311 298 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms