RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 Q9N2K0 584 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 MYNNQ9NPC7 610 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 FGF21Q9NSA1 209 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.9□□□□□ -1.79
LRCH3-211ENST00000466054 CPSF3Q9UKF6 684 aaKnown RBP3.9□□□□□ -1.79
LRCH3-211ENST00000466054 RPS6KL1Q9Y6S9 549 aa3.9□□□□□ -1.79
LRCH3-211ENST00000466054 IGLV9-49A0A0B4J1Y8 123 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 LOC101059948A0A1B0GTJ6 334 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 CCDC188H7C350 402 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 CLDN4O14493 209 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 SLC22A2O15244 555 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 ATP6V0E1O15342 81 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 RECQL5O94762 991 aaPredicted RBP3.89□□□□□ -1.79
LRCH3-211ENST00000466054 SLCO2B1O94956 709 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 ATP5BP06576 529 aaKnown RBP3.89□□□□□ -1.79
LRCH3-211ENST00000466054 QDPRP09417 244 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 PLA2G4BP0C869 781 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 ERVK-10P10266 1014 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 SAGP10523 405 aaPredicted RBP3.89□□□□□ -1.79
LRCH3-211ENST00000466054 HSPA8P11142 646 aaKnown RBP3.89□□□□□ -1.79
LRCH3-211ENST00000466054 LHX1P48742 406 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 MAPK12P53778 367 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 TUBB4BP68371 445 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 ACSM1Q08AH1 577 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 DMPKQ09013 629 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 ITGA7Q13683 1181 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 PSMD6Q15008 389 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 KRBOX4Q5JUW0 171 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 DCAF10Q5QP82 559 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 ZBTB49Q6ZSB9 765 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 MFSD6Q6ZSS7 791 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 MYPOPQ86VE0 399 aaPredicted RBP3.89□□□□□ -1.79
LRCH3-211ENST00000466054 DNAJC22Q8N4W6 341 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 ZNF611Q8N823 705 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 MUS81Q96NY9 551 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 DUX3Q96PT4 197 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 FNBP1Q96RU3 617 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 RAD9AQ99638 391 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 NAA11Q9BSU3 229 aaPredicted RBP3.89□□□□□ -1.79
LRCH3-211ENST00000466054 PANK2Q9BZ23 570 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 LAT2Q9GZY6 243 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 GIMAP2Q9UG22 337 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 SMAD5-AS1Q9Y6J3 95 aa3.89□□□□□ -1.79
LRCH3-211ENST00000466054 COL2A1P02458 1487 aaPredicted RBP3.88□□□□□ -1.79
LRCH3-211ENST00000466054 KIAA1210Q9ULL0 1709 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 DNM1LO00429 736 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 EDN1P05305 212 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 FRMD6-AS1P0C7T7 363 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 SMIM18P0DKX4 95 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 HAPLN1P10915 354 aaPredicted RBP3.88□□□□□ -1.79
LRCH3-211ENST00000466054 CA4P22748 312 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 MPZP25189 248 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 MNDAP41218 407 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 CRIP2P52943 208 aaPredicted RBP3.88□□□□□ -1.79
LRCH3-211ENST00000466054 HERV-K104P61576 105 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 CUL3Q13618 768 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 CA9Q16790 459 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 ODF4Q2M2E3 257 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 HYAL4Q2M3T9 481 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 ITPRIPL2Q3MIP1 535 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 KIAA1644Q3SXP7 199 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 FAM133BQ5BKY9 247 aaKnown RBP3.88□□□□□ -1.79
LRCH3-211ENST00000466054 ERN2Q76MJ5 926 aaKnown RBP3.88□□□□□ -1.79
LRCH3-211ENST00000466054 NUP54Q7Z3B4 507 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 SLFN11Q7Z7L1 901 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 MAPKAPK5-AS1Q8N8E1 139 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 CAMKVQ8NCB2 501 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 TRIM58Q8NG06 486 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 PHLDA1Q8WV24 401 aaPredicted RBP3.88□□□□□ -1.79
LRCH3-211ENST00000466054 MRPS27Q92552 414 aaKnown RBP3.88□□□□□ -1.79
LRCH3-211ENST00000466054 FBXO17Q96EF6 278 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 RAB3IPQ96QF0 476 aaPredicted RBP3.88□□□□□ -1.79
LRCH3-211ENST00000466054 F2RL3Q96RI0 385 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 CPNE1Q99829 537 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 PITPNM3Q9BZ71 974 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 S1PR5Q9H228 398 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 TRPV4Q9HBA0 871 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 A4GALTQ9NPC4 353 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 PFDN4Q9NQP4 134 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 SDR39U1Q9NRG7 319 aaPredicted RBP3.88□□□□□ -1.79
LRCH3-211ENST00000466054 C2orf42Q9NWW7 574 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 C2CD2Q9Y426 696 aa3.88□□□□□ -1.79
LRCH3-211ENST00000466054 IGHV4-61A0A0C4DH41 118 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 ANKRD61A6NGH8 418 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 PLOD2O00469 737 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 CLPTM1O96005 669 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 IGHV4-59P01825 116 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 OR52Z1P0C646 297 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 PTAFRP25105 342 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 PTPN3P26045 913 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 CEACAM8P31997 349 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-211ENST00000466054 PTGER4P35408 488 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 KRT2P35908 639 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 MAZP56270 477 aaKnown RBP3.87□□□□□ -1.79
LRCH3-211ENST00000466054 POLR2LP62875 67 aaKnown RBP3.87□□□□□ -1.79
LRCH3-211ENST00000466054 KCNJ10P78508 379 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 GPR17Q13304 367 aa3.87□□□□□ -1.79
LRCH3-211ENST00000466054 PPIGQ13427 754 aaKnown RBP eCLIP3.87□□□□□ -1.79
LRCH3-211ENST00000466054 PDLIM3Q53GG5 364 aaPredicted RBP3.87□□□□□ -1.79
LRCH3-211ENST00000466054 SPDYCQ5MJ68 293 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms