RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 CYP4Z2PQ8N1L4 340 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 KHSRPQ92945 711 aaKnown RBP eCLIP8.88□□□□□ -0.99
HPS4-208ENST00000464362 GFM1Q96RP9 751 aaKnown RBP8.88□□□□□ -0.99
HPS4-208ENST00000464362 IL12RB2Q99665 862 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 CNPPD1Q9BV87 410 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 MUC13Q9H3R2 512 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 SNTG1Q9NSN8 517 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 CCM2LQ9NUG4 571 aaPredicted RBP8.88□□□□□ -0.99
HPS4-208ENST00000464362 NUMBLQ9Y6R0 609 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.88□□□□□ -0.99
HPS4-208ENST00000464362 ZNF487B1APH4 448 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 SYN3O14994 580 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 HPGDP15428 266 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 SELPP16109 830 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 ITGA2P17301 1181 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 MAP2K4P45985 399 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.88□□□□□ -0.99
HPS4-208ENST00000464362 ELP6Q0PNE2 266 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 SMARCB1Q12824 385 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 C9orf64Q5T6V5 341 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 C16orf62Q7Z3J2 963 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 AKAP14Q86UN6 197 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 OR5K1Q8NHB7 308 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 WDR48Q8TAF3 677 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 CD99L2Q8TCZ2 262 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 KLK6Q92876 244 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 USP22Q9UPT9 525 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 GSTK1Q9Y2Q3 226 aa8.88□□□□□ -0.99
HPS4-208ENST00000464362 PAPPAQ13219 1627 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 MTMR11A4FU01 709 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 M0QX08 132 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 CASKO14936 926 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 PRAMEF11O60813 436 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 SOX14O95416 240 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 ACLYP53396 1101 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 DNAJB13P59910 316 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 ARPC4P59998 168 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 AP1S1P61966 158 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 COX10Q12887 443 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 ZBTB6Q15916 424 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 SNAPC1Q16533 368 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 HMGN2P46Q86SG4 172 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 CHPFQ8IZ52 775 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 RGL4Q8IZJ4 473 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 LILRA2Q8N149 483 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 TMEM199Q8N511 208 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 BEND7Q8N7W2 519 aaPredicted RBP8.87□□□□□ -0.99
HPS4-208ENST00000464362 OLIG1Q8TAK6 271 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 ZNF671Q8TAW3 534 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 CITED4Q96RK1 184 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 CCDC3Q9BQI4 270 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 TMEM106CQ9BVX2 250 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 DERL2Q9GZP9 239 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 SEMA3GQ9NS98 782 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 SLAMF8Q9P0V8 285 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 ENOPH1Q9UHY7 261 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 SSR3Q9UNL2 185 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 IFNW1P05000 195 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 CYP11A1P05108 521 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 TFAP2AP05549 437 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 NTSP30990 170 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 PREPP48147 710 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 ALDH3A2P51648 485 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 APLP1P51693 650 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 RAB25P57735 213 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 MEF2AQ02078 507 aaPredicted RBP8.87□□□□□ -0.99
HPS4-208ENST00000464362 IL18R1Q13478 541 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 ABRAXAS2Q15018 415 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 MARCH8Q5T0T0 291 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 FAM219BQ5XKK7 198 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 SDE2Q6IQ49 451 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 ARMC6Q6NXE6 501 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 FAM180BQ6P0A1 224 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 KLHL35Q6PF15 583 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 UGT2A3Q6UWM9 527 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 CSGALNACT1Q8TDX6 532 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 DIRAS2Q96HU8 199 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 DPH2Q9BQC3 489 aaPredicted RBP8.87□□□□□ -0.99
HPS4-208ENST00000464362 DCSTAMPQ9H295 470 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 TVP23BQ9NYZ1 205 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 ZIM2Q9NZV7 527 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 SCML2Q9UQR0 700 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 SPO11Q9Y5K1 396 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 CNMDO75829 334 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 PRPS2P11908 318 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 MAGEA10P43363 369 aaPredicted RBP8.87□□□□□ -0.99
HPS4-208ENST00000464362 SLC11A1P49279 550 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 STK19P49842 368 aaPredicted RBP8.87□□□□□ -0.99
HPS4-208ENST00000464362 C6orf183Q5T699 404 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 ANXA8L1Q5VT79 327 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 OR2T5Q6IEZ7 315 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.87□□□□□ -0.99
HPS4-208ENST00000464362 MACC1Q6ZN28 852 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 PAQR9Q6ZVX9 377 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 SNX20Q7Z614 316 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 FAM124AQ86V42 546 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 C17orf64Q86WR6 236 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 OOSP2Q86WS3 158 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 SLC22A15Q8IZD6 547 aa8.87□□□□□ -0.99
HPS4-208ENST00000464362 CDK20Q8IZL9 346 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms