RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 ICKQ9UPZ9 632 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 PCDHGB2Q9Y5G2 931 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 DNAH14Q0VDD8 3507 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 OTOGLQ3ZCN5 2332 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 MUC6Q6W4X9 2439 aa13.92□□□□□ -0.18
COL6A1-202ENST00000463060 RALGAPA1Q6GYQ0 2036 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 LY6G6EA0A0G2JKS1 128 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 E2F3O00716 465 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 CDX4O14627 284 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-202ENST00000463060 POLR3GO15318 223 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-202ENST00000463060 PRICKLE3O43900 615 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-202ENST00000463060 LRP3O75074 770 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 VIPP01282 170 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 LMNAP02545 664 aaKnown RBP13.91□□□□□ -0.18
COL6A1-202ENST00000463060 RPS17P08708 135 aaKnown RBP13.91□□□□□ -0.18
COL6A1-202ENST00000463060 BGNP21810 368 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 PKLRP30613 574 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 HSD17B2P37059 387 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 GDF5P43026 501 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 HSPA7P48741 367 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 PNLIPRP1P54315 467 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 MAZP56270 477 aaKnown RBP13.91□□□□□ -0.18
COL6A1-202ENST00000463060 GUCY1A3Q02108 690 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 GPR18Q14330 331 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 SF3A2Q15428 464 aaKnown RBP13.91□□□□□ -0.18
COL6A1-202ENST00000463060 CHI3L2Q15782 390 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 PTCHD3Q3KNS1 767 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 C14orf28Q4W4Y0 310 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 SLC9B2Q86UD5 537 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 SLC35F3Q8IY50 421 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 FAM181AQ8N9Y4 354 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 LMNTD1Q8N9Z9 388 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 LINC01555Q8NAE3 123 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 AVL9Q8NBF6 648 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 OR2L8Q8NGY9 312 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 MAPK15Q8TD08 544 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 ZNF483Q8TF39 744 aaPredicted RBP13.91□□□□□ -0.18
COL6A1-202ENST00000463060 IL17FQ96PD4 163 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 EGFL8Q99944 293 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 ATG10Q9H0Y0 220 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 ZBTB26Q9HCK0 441 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 INTS7Q9NVH2 962 aaKnown RBP13.91□□□□□ -0.18
COL6A1-202ENST00000463060 GMEB2Q9UKD1 530 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 PCTPQ9UKL6 214 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 PLAGL1Q9UM63 463 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 TDRKHQ9Y2W6 561 aaKnown RBP13.91□□□□□ -0.18
COL6A1-202ENST00000463060 TNPO3Q9Y5L0 923 aaKnown RBP13.91□□□□□ -0.18
COL6A1-202ENST00000463060 U3KQA8 63 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 MYO15AQ9UKN7 3530 aa13.91□□□□□ -0.18
COL6A1-202ENST00000463060 A0A1W2PPV9 198 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 NPHS1O60500 1241 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 SNNO75324 88 aaPredicted RBP13.9□□□□□ -0.18
COL6A1-202ENST00000463060 STK16O75716 305 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 S100BP04271 92 aaPredicted RBP13.9□□□□□ -0.18
COL6A1-202ENST00000463060 SERPINE1P05121 402 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 EPORP19235 508 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 EEF1DP29692 281 aaKnown RBP13.9□□□□□ -0.18
COL6A1-202ENST00000463060 RAB28P51157 221 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 HHEXQ03014 270 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 PCDH1Q08174 1060 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 ASPHQ12797 758 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 NAE1Q13564 534 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 FASTKQ14296 549 aaKnown RBP13.9□□□□□ -0.18
COL6A1-202ENST00000463060 KRT33BQ14525 404 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 NR1D2Q14995 579 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 CSRP2Q16527 193 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 ANKS6Q68DC2 871 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 ZCCHC8Q6NZY4 707 aaKnown RBP13.9□□□□□ -0.18
COL6A1-202ENST00000463060 ZCCHC23Q6ZST2 131 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 TMEM26Q6ZUK4 368 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 ZNF438Q7Z4V0 828 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 ALYREFQ86V81 257 aaKnown RBP13.9□□□□□ -0.18
COL6A1-202ENST00000463060 LSMEM2Q8N112 164 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 ARL10Q8N8L6 244 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 KYQ8NBH2 561 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 MAGEB18Q96M61 343 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 NSUN5Q96P11 429 aaKnown RBP13.9□□□□□ -0.18
COL6A1-202ENST00000463060 DUSP23Q9BVJ7 150 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 GTPBP2Q9BX10 602 aaKnown RBP13.9□□□□□ -0.18
COL6A1-202ENST00000463060 PITPNM3Q9BZ71 974 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 C20orf27Q9GZN8 174 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 SLC32A1Q9H598 525 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 XKR8Q9H6D3 395 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 MANSC1Q9H8J5 431 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 PARD6AQ9NPB6 346 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 ACSS2Q9NR19 701 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 SEMA4GQ9NTN9 838 aa13.9□□□□□ -0.18
COL6A1-202ENST00000463060 LILRA5A6NI73 299 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 K7EPI3 171 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 ITM2AO43736 263 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 NUDT21O43809 227 aaKnown RBP13.89□□□□□ -0.19
COL6A1-202ENST00000463060 H2AFYO75367 372 aaKnown RBP13.89□□□□□ -0.19
COL6A1-202ENST00000463060 NPPBP16860 134 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 GRK2P25098 689 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 SHMT2P34897 504 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 SERPINB5P36952 375 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 NAA20P61599 178 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 SPEM2Q0P670 501 aa13.89□□□□□ -0.19
COL6A1-202ENST00000463060 GALNT1Q10472 559 aaPredicted RBP13.89□□□□□ -0.19
COL6A1-202ENST00000463060 BST1Q10588 318 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms