RNA–Protein interactions for RNA: ENST00000461578.1

PABPC4-208, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 5

Gene PABPC4, Length 193 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-208ENST00000461578 CUTCQ9NTM9 273 aa13.18□□□□□ -0.3
PABPC4-208ENST00000461578 ZDHHC3Q9NYG2 299 aa13.18□□□□□ -0.3
PABPC4-208ENST00000461578 NF1P21359 2839 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 TRAV17A0A0B4J275 112 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 MAP2K7O14733 419 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 DSCR3O14972 297 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 PRICKLE3O43900 615 aaPredicted RBP13.17□□□□□ -0.3
PABPC4-208ENST00000461578 HPP00738 406 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 ACPPP15309 386 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 ACRV1P26436 265 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 PBX1P40424 430 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 GRIA3P42263 894 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 CDKN2BP42772 138 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 TNFSF10P50591 281 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 ZNF140P52738 457 aaPredicted RBP13.17□□□□□ -0.3
PABPC4-208ENST00000461578 GEMP55040 296 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 KRTAP21-3Q3LHN1 58 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 MTFR2Q6P444 385 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 TAX1BP1Q86VP1 789 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 SERPINA9Q86WD7 417 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 TBC1D21Q8IYX1 336 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 C2orf73Q8N5S3 287 aaPredicted RBP13.17□□□□□ -0.3
PABPC4-208ENST00000461578 BRIX1Q8TDN6 353 aaKnown RBP13.17□□□□□ -0.3
PABPC4-208ENST00000461578 P3H4Q92791 437 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 VAT1Q99536 393 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.17□□□□□ -0.3
PABPC4-208ENST00000461578 SLC26A1Q9H2B4 701 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 OR6C2Q9NZP2 312 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 SEC14L3Q9UDX4 400 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 CIDEBQ9UHD4 219 aa13.17□□□□□ -0.3
PABPC4-208ENST00000461578 NXT1Q9UKK6 140 aaKnown RBP13.17□□□□□ -0.3
PABPC4-208ENST00000461578 PCNX1Q96RV3 2341 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 IGLV3-16A0A075B6K0 115 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 KCNN4O15554 427 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 CRTAMO95727 393 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 ACADLP28330 430 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 SSTR2P30874 369 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 ARHGAP25P42331 645 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 ADORA2A-AS1P86434 159 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 KLC1Q07866 573 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 TFDP2Q14188 446 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 KIR2DS3Q14952 304 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 INAQ16352 499 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 ARHGEF18Q6ZSZ5 1173 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 CDH24Q86UP0 819 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 KBTBD2Q8IY47 623 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 TTC29Q8NA56 475 aaPredicted RBP13.16□□□□□ -0.3
PABPC4-208ENST00000461578 DENND1AQ8TEH3 1009 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 ELMO1Q92556 727 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 DNAJC1Q96KC8 554 aaKnown RBP13.16□□□□□ -0.3
PABPC4-208ENST00000461578 QKIQ96PU8 341 aaKnown RBP eCLIP13.16□□□□□ -0.3
PABPC4-208ENST00000461578 BPIFA3Q9BQP9 254 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 GBA3Q9H227 469 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 DDX56Q9NY93 547 aaKnown RBP13.16□□□□□ -0.3
PABPC4-208ENST00000461578 POLG2Q9UHN1 485 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 CAPN11Q9UMQ6 739 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 LUC7L2Q9Y383 392 aaKnown RBP13.16□□□□□ -0.3
PABPC4-208ENST00000461578 PRSS21Q9Y6M0 314 aa13.16□□□□□ -0.3
PABPC4-208ENST00000461578 VSTM2BA6NLU5 285 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 LIN7AO14910 233 aaPredicted RBP13.15□□□□□ -0.3
PABPC4-208ENST00000461578 ANXA9O76027 345 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 WISP2O76076 250 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 USP1O94782 785 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 RASAL1O95294 804 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 ONECUT2O95948 504 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 CELA2AP08217 269 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 TMEM253P0C7T8 217 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 PRR35P0CG20 571 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 ESRRAP11474 423 aaPredicted RBP13.15□□□□□ -0.3
PABPC4-208ENST00000461578 SOX11P35716 441 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 CSE1LP55060 971 aaKnown RBP13.15□□□□□ -0.3
PABPC4-208ENST00000461578 CASP6P55212 293 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 RBPJQ06330 500 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 GRM7Q14831 915 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 CDSNQ15517 529 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 SLC18A3Q16572 532 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 GPR33Q49SQ1 333 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 LRRC38Q5VT99 294 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 XKRXQ6PP77 449 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 RANBP10Q6VN20 620 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 SPNS3Q6ZMD2 512 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 NLRP9Q7RTR0 991 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 CCDC50Q8IVM0 306 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 OR5K2Q8NHB8 316 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 MIEF2Q96C03 454 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 POM121Q96HA1 1249 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 SMARCAL1Q9NZC9 954 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.15□□□□□ -0.3
PABPC4-208ENST00000461578 ABI3Q9P2A4 366 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 TINAGQ9UJW2 476 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 C3orf18Q9UK00 162 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 TRHDEQ9UKU6 1024 aa13.15□□□□□ -0.3
PABPC4-208ENST00000461578 NSG1A0A0A6YYJ2 146 aa13.14□□□□□ -0.31
PABPC4-208ENST00000461578 TRBV5-4A0A0C4DH59 114 aa13.14□□□□□ -0.31
PABPC4-208ENST00000461578 H7C0C1 242 aa13.14□□□□□ -0.31
PABPC4-208ENST00000461578 MED26O95402 600 aa13.14□□□□□ -0.31
PABPC4-208ENST00000461578 AP2A1O95782 977 aa13.14□□□□□ -0.31
PABPC4-208ENST00000461578 CRYABP02511 175 aaKnown RBP13.14□□□□□ -0.31
PABPC4-208ENST00000461578 GYPCP04921 128 aa13.14□□□□□ -0.31
PABPC4-208ENST00000461578 PSMB4P28070 264 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms