RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 MGAQ8IWI9 3026 aa12.83□□□□□ -0.35
RAB11FIP3-207ENST00000461009 EIF3FO00303 357 aaPredicted RBP12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SLC28A2O43868 658 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ZNF500O60304 480 aaPredicted RBP12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FAM87AP0C7U9 286 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ENO3P13929 434 aaPredicted RBP12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 NELFEP18615 380 aaKnown RBP12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CD9P21926 228 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SSTR1P30872 391 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CCNFP41002 786 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 RGS4P49798 205 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ACY1Q03154 408 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 TMTC4Q5T4D3 741 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 LRRC8EQ6NSJ5 796 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CAPN12Q6ZSI9 719 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PRICKLE2Q7Z3G6 844 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 STRA8Q7Z7C7 330 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 DCUN1D3Q8IWE4 304 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CARFQ8N187 725 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 RAB42Q8N4Z0 105 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 EXD3Q8N9H8 876 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 OR52E1Q8NGJ3 308 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 KLHL6Q8WZ60 621 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 RAD51AP1Q96B01 352 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ELMO2Q96JJ3 720 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FMO2Q99518 471 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 GPR21Q99679 349 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SPRY4Q9C004 299 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 GEMIN8Q9NWZ8 242 aaKnown RBP12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SIDT1Q9NXL6 827 aaKnown RBP12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 TRMT6Q9UJA5 497 aaKnown RBP12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 KCND3Q9UK17 655 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 RARRES3Q9UL19 164 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 VWA7Q9Y334 891 aa12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FASNP49327 2511 aaKnown RBP12.83□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ESPNB1AK53 854 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 MATN4O95460 622 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 DLGAP3O95886 979 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CATP04040 527 aaKnown RBP12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 F7P08709 466 aaPredicted RBP12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 MPC1LP0DKB6 136 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FGF5P12034 268 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 POLR2CP19387 275 aaPredicted RBP12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 WT1P19544 449 aaPredicted RBP12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 TCN2P20062 427 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 GABRB3P28472 473 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 STX2P32856 288 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PHBP35232 272 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 TUBB4BP68371 445 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SH3BP2P78314 561 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 HSD11B2P80365 405 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 GBX1Q14549 363 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 KYNUQ16719 465 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 KLHL38Q2WGJ6 581 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FAM45BPQ6NSW5 357 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 GPATCH11Q8N954 259 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FAM45AQ8TCE6 357 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 FCRL4Q96PJ5 515 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 RAB11FIP5Q9BXF6 653 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SLC25A18Q9H1K4 315 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 L2HGDHQ9H9P8 463 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 LRRC4CQ9HCJ2 640 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 OR6C2Q9NZP2 312 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 GALPQ9UBC7 116 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 LNPEPQ9UIQ6 1025 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PADI1Q9ULC6 663 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SLC39A10Q9ULF5 831 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PCM1Q15154 2024 aa12.82□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SMG1Q96Q15 3661 aaKnown RBP12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 LOC101059948A0A1B0GTJ6 334 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 TCRBV9S1A1TA0A576 114 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PIPSLA2A3N6 862 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 GSAPA4D1B5 854 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 TLCD2A6NGC4 264 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 C2orf74A8MZ97 194 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 KIF1CO43896 1103 aaKnown RBP12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 KIAA0754O94854 1291 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 C1orf105O95561 183 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 RHOXF2BP0C7M4 288 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PRKAR1AP10644 381 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 DLSTP36957 453 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 STAT5AP42229 794 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 RAB28P51157 221 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 PDAP1Q13442 181 aaKnown RBP12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 TUBB3Q13509 450 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CRTC2Q53ET0 693 aaPredicted RBP12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 ACSBG2Q5FVE4 666 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 HECTD2Q5U5R9 776 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 TIPARPQ7Z3E1 657 aaKnown RBP12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 RELL1Q8IUW5 271 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CTAGE3PQ8IX95 158 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 GALNT6Q8NCL4 622 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 STARD8Q92502 1023 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 SLC22A18Q96BI1 424 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 VPS39Q96JC1 886 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 NDNQ99608 321 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 CPNE1Q99829 537 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 RHOXF2Q9BQY4 288 aa12.81□□□□□ -0.36
RAB11FIP3-207ENST00000461009 XKR8Q9H6D3 395 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms