RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 ZNF669Q96BR6 464 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 LRRC39Q96DD0 335 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 CXorf40BQ96DE9 158 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 ZDHHC12Q96GR4 267 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 SNF8Q96H20 258 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 C16orf45Q96MC5 204 aaPredicted RBP13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 C12orf66Q96MD2 445 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 PWWP2AQ96N64 755 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 LRFN5Q96NI6 719 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 TGM7Q96PF1 710 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 TTC1Q99614 292 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 SMAD5Q99717 465 aaKnown RBP13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 BARD1Q99728 777 aaKnown RBP13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 EBNA1BP2Q99848 306 aaKnown RBP13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 ERP44Q9BS26 406 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 MENTQ9BUN1 341 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 GRHL1Q9NZI5 618 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 IL1RAPL1Q9NZN1 696 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 RARRES3Q9UL19 164 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 SRPK3Q9UPE1 567 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 ENTPD4Q9Y227 616 aa13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 CFAP20Q9Y6A4 193 aaKnown RBP13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 SNRNP200O75643 2136 aaKnown RBP13.22□□□□□ -0.29
SCAMP4-206ENST00000460767 CELSR2Q9HCU4 2923 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 ARGFXA6NJG6 315 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 IQCF5A8MTL0 148 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 HNRNPRO43390 633 aaKnown RBP13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 BANF1O75531 89 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 TTC4O95801 387 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 POLBP06746 335 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 SLC35G4P0C7Q5 338 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 PGAM1P18669 254 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 PAMP19021 973 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 NDUFS1P28331 727 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 SEPHS1P49903 392 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 ITGA8P53708 1063 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 RPS15P62841 145 aaKnown RBP13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 MRNIPQ6NTE8 343 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 GALNT7Q86SF2 657 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 KMT5CQ86Y97 462 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 VRK3Q8IV63 474 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 LMNTD2Q8IXW0 634 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 IQCKQ8N0W5 287 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 NAT9Q9BTE0 207 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 TFB2MQ9H5Q4 396 aaKnown RBP13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 MVB12BQ9H7P6 319 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 INTS10Q9NVR2 710 aaKnown RBP13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 SAMD15Q9P1V8 674 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 WHRNQ9P202 907 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 C5AR2Q9P296 337 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 HEBP2Q9Y5Z4 205 aa13.21□□□□□ -0.29
SCAMP4-206ENST00000460767 LRBAP50851 2863 aa13.21□□□□□ -0.3
SCAMP4-206ENST00000460767 FBN2P35556 2912 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 OR5K3A6NET4 321 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 CPNE3O75131 537 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 RASSF9O75901 435 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 ESR1P03372 595 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 TUBB4AP04350 444 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 AMD1P17707 334 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 GABRB3P28472 473 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 CCL11P51671 97 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 PPP1CAP62136 330 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 TIAL1Q01085 375 aaKnown RBP eCLIP13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 ACY1Q03154 408 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 C2orf54Q08AI8 447 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 CHAF1BQ13112 559 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 TUBB3Q13509 450 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 GRB7Q14451 532 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 LONRF1Q17RB8 773 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 CACHD1Q5VU97 1274 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 PWWP2BQ6NUJ5 590 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 ZNF549Q6P9A3 640 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 MED25Q71SY5 747 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 MAATS1Q7Z4T9 603 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 DENND6AQ8IWF6 608 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 TRIM48Q8IWZ4 208 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 TMEM102Q8N9M5 508 aaPredicted RBP13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 ACVR1CQ8NER5 493 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 FDCSPQ8NFU4 85 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 ASZ1Q8WWH4 475 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 ELMO1Q92556 727 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 TFGQ92734 400 aaPredicted RBP13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 SNRNP40Q96DI7 357 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 RUFY1Q96T51 708 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 NUDT9Q9BW91 350 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 PHACTR1Q9C0D0 580 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 IMP3Q9NV31 184 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 ANAPC5Q9UJX4 755 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 FARSAQ9Y285 508 aaKnown RBP13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 C2CD3Q4AC94 2353 aa13.2□□□□□ -0.3
SCAMP4-206ENST00000460767 EFCAB8A8MWE9 144 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 C1QAP02745 245 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 RAB40ALP0C0E4 278 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 TYRP1P17643 537 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 ATP5DP30049 168 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 SLC1A2P43004 574 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 ITGA1P56199 1179 aa13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 RPS18P62269 152 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 MRPS25P82663 173 aaKnown RBP13.19□□□□□ -0.3
SCAMP4-206ENST00000460767 NR6A1Q15406 480 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms