RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 THEGLP0DJG4 465 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 CSNK1EP49674 416 aaKnown RBP10.07□□□□□ -0.8
USP39-210ENST00000459775 HK3P52790 923 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 GTF2H3Q13889 308 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 NFATC4Q14934 902 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 PHKG1Q16816 387 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 ALG11Q2TAA5 492 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 INTS11Q5TA45 600 aaKnown RBP10.07□□□□□ -0.8
USP39-210ENST00000459775 ZNF600Q6ZNG1 722 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 ABI3BPQ7Z7G0 1075 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 HID1Q8IV36 788 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 ZBTB8BQ8NAP8 495 aaPredicted RBP10.07□□□□□ -0.8
USP39-210ENST00000459775 LZICQ8WZA0 190 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 ALKBH8Q96BT7 664 aaKnown RBP10.07□□□□□ -0.8
USP39-210ENST00000459775 TUBA1CQ9BQE3 449 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 TMEM168Q9H0V1 697 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 CARS2Q9HA77 564 aaKnown RBP10.07□□□□□ -0.8
USP39-210ENST00000459775 SSU72Q9NP77 194 aaKnown RBP10.07□□□□□ -0.8
USP39-210ENST00000459775 LATS2Q9NRM7 1088 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 KLC4Q9NSK0 619 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 RAB23Q9ULC3 237 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 EDARQ9UNE0 448 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 SLC17A4Q9Y2C5 497 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 SNX8Q9Y5X2 465 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 GMEB1Q9Y692 573 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 CFAP54Q96N23 3096 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 GVINP1Q7Z2Y8 2422 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 PRSS38A1L453 326 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 NDUFB5O43674 189 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 DLX3O60479 287 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 AP2A2O94973 939 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 ZWINTO95229 277 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 EML2O95834 649 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 TROVE2P10155 538 aaKnown RBP eCLIP10.07□□□□□ -0.8
USP39-210ENST00000459775 BGNP21810 368 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 CD27P26842 260 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 ALDH3A1P30838 453 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 MDH1P40925 334 aaKnown RBP10.07□□□□□ -0.8
USP39-210ENST00000459775 DHPSP49366 369 aaPredicted RBP10.07□□□□□ -0.8
USP39-210ENST00000459775 THOP1P52888 689 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 PCLAFQ15004 111 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 FAM83EQ2M2I3 478 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 CCSMST1Q4G0I0 132 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 SYTL3Q4VX76 610 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 PYCR3Q53H96 274 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 TECRLQ5HYJ1 363 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 SPATA24Q86W54 205 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 OR56A4Q8NGH8 313 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 C1orf216Q8TAB5 229 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 PHF21BQ96EK2 531 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 CABS1Q96KC9 395 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 PANX3Q96QZ0 392 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 OSGEPL1Q9H4B0 414 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 TM9SF3Q9HD45 589 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.07□□□□□ -0.8
USP39-210ENST00000459775 ZNF624Q9P2J8 865 aaPredicted RBP10.07□□□□□ -0.8
USP39-210ENST00000459775 ANKRD6Q9Y2G4 727 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 SSUH2Q9Y2M2 353 aa10.07□□□□□ -0.8
USP39-210ENST00000459775 TRBV23OR9-2A0A075B6M9 112 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 SLC5A10A0PJK1 596 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 YKT6O15498 198 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 GPC4O75487 556 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 CNOT4O95628 575 aaKnown RBP10.06□□□□□ -0.8
USP39-210ENST00000459775 FTH1P02794 183 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 DHRS4L1P0CG22 281 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 ARRB2P32121 409 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 SEC24CP53992 1094 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 C1orf61Q13536 156 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 FZD2Q14332 565 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 INSCQ1MX18 579 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 ANKDD1AQ495B1 522 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 BCL7AQ4VC05 210 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 LAIR1Q6GTX8 287 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 DUS1LQ6P1R4 473 aaKnown RBP10.06□□□□□ -0.8
USP39-210ENST00000459775 SBSNQ6UWP8 590 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 LRRTM4Q86VH4 590 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 AMZ2Q86W34 360 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 DENND6BQ8NEG7 585 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 DYDC1Q8WWB3 177 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 WDR92Q96MX6 357 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 ZCCHC2Q9C0B9 1178 aaKnown RBP10.06□□□□□ -0.8
USP39-210ENST00000459775 C20orf27Q9GZN8 174 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 DERL2Q9GZP9 239 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 COG4Q9H9E3 785 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 POPDC3Q9HBV1 291 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 SYTL2Q9HCH5 934 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 ASB1Q9Y576 335 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 HS3ST3A1Q9Y663 406 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 PIKFYVEQ9Y2I7 2098 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 A6NNZ2 444 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 A8MVJ9 347 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 SLC30A4O14863 429 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 TM9SF1O15321 606 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 NVLO15381 856 aaKnown RBP10.06□□□□□ -0.8
USP39-210ENST00000459775 MAGEC1O60732 1142 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 SIX3O95343 332 aaPredicted RBP10.06□□□□□ -0.8
USP39-210ENST00000459775 TGDSO95455 350 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 APOA4P06727 396 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 UBL4AP11441 157 aa10.06□□□□□ -0.8
USP39-210ENST00000459775 MTHFD2P13995 350 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms